Jatropha Genome Database

JcCB0135201.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0135201.20 - phase: 2 /partial
         (175 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011278 WRKY transcription factor, putative                     188   7e-48

>30190.m011278 WRKY transcription factor, putative
          Length = 558

 Score =  188 bits (95), Expect = 7e-48
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagctactaccggtgcacacaacatacctgcaacgtgaagaaacagatccaacggctgtc 60
           |||||||||||| ||||| || ||||||||||| || ||||||||||| ||| |||||||
Sbjct: 381 gagctactaccgctgcacgcaccatacctgcaatgtcaagaaacagatacaaaggctgtc 440

                                                                       
Query: 61  aaaagattcgagcattgtagtgaccacatatgagggcattcataaccatccgtgtgagaa 120
           ||||||||| ||||| |||||||| |||||||||||||| ||||| ||||| ||||| ||
Sbjct: 441 aaaagattcaagcatagtagtgacaacatatgagggcatccataatcatccttgtgaaaa 500

                                                                  
Query: 121 agttatggagaccttaagcccccttctaagggagctccagttcctatctagaatt 175
           ||| ||||||| |||| |||||||||||||| || | ||||||||||||||||||
Sbjct: 501 agtaatggagagcttaggcccccttctaaggcagttgcagttcctatctagaatt 555