Jatropha Genome Database

JcCB0135201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0135201.10 + phase: 0 /partial
         (423 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011279 hypothetical protein                                    315   1e-85

>30190.m011279 hypothetical protein
          Length = 4578

 Score =  315 bits (159), Expect = 1e-85
 Identities = 354/419 (84%)
 Strand = Plus / Plus

                                                                        
Query: 5    tgctttcaggagcttcagaaacagcaattaccacagtgatttctgctttgagtttttccc 64
            ||||||| ||||| |||||||||||| | |||||||||||||| |||||||| |||||||
Sbjct: 4157 tgctttcgggagcatcagaaacagcagtgaccacagtgatttcagctttgagcttttccc 4216

                                                                        
Query: 65   ctgatggagaggggctcattgctttttctgagcatggtttgatgatcagatggtggtcat 124
            |||||||||| |||||  | |||||||||||||||||||||||||| |||||||||||||
Sbjct: 4217 ctgatggagatgggctggtagctttttctgagcatggtttgatgattagatggtggtcat 4276

                                                                        
Query: 125  tgggatccatgtggtgggaaaaattgaacagaaaccttgttcctgtccaatgcaccaaac 184
            |||||||  | |||||||| ||| ||| ||||||||||||||||||||| || |||||||
Sbjct: 4277 tgggatctgtatggtgggagaaactgagcagaaaccttgttcctgtccagtgtaccaaac 4336

                                                                        
Query: 185  taatatttgttcctctatgggaaggcttctctcccaattcctctaggactagcatcatgg 244
            | ||||||||||||| ||||||||| |||||||||||||  |||||| ||||  | ||| 
Sbjct: 4337 ttatatttgttcctccatgggaaggattctctcccaatttttctaggtctagtgtaatga 4396

                                                                        
Query: 245  caagcatatcaggtcatgatagacagaccaatttgcaggagaatgctagaagtttgaatt 304
             || ||||   || || ||||| ||||||||||| ||||||||| ||||  |||  ||| 
Sbjct: 4397 taaacataatggggcacgataggcagaccaatttacaggagaatactaggggttcaaatc 4456

                                                                        
Query: 305  atgcagacagtttgaagatactaattcaaaatctcgacctctcttaccggctagagtggg 364
            |||| |||| | |||||||  || |||| ||||| || ||||| ||||| ||||| ||||
Sbjct: 4457 atgctgacaatctgaagatggtagttcataatcttgatctctcgtaccgcctagaatggg 4516

                                                                       
Query: 365  ttggtggacgcaaggtacttctttcgaggcacggcatggagttgggaacttttccatta 423
            || ||  ||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||||
Sbjct: 4517 ttagtaaacgtaaggttcttctttctaggcatggcatggagttgggcactttcccatta 4575