Jatropha Genome Database

JcCB0130751.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0130751.20 + phase: 0 /partial
         (465 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002112 phenazine biosynthesis protein, putative                121   4e-27
29647.m002111 phenazine biosynthesis protein, putative                103   9e-22

>29647.m002112 phenazine biosynthesis protein, putative
          Length = 1470

 Score =  121 bits (61), Expect = 4e-27
 Identities = 269/340 (79%), Gaps = 3/340 (0%)
 Strand = Plus / Plus

                                                                       
Query: 113 aggtggacgcgttcacggactcagccttcatgggaaacccagcagcggtatgtttgctag 172
           |||||||||| |||||  | ||||| |||| ||| ||||||||||| || |||||  |||
Sbjct: 596 aggtggacgcattcaccaattcagctttcaaggggaacccagcagctgtttgtttattag 655

                                                                       
Query: 173 aggacgnnnnnnntgagaaatggttgcaagctgtagctactgaattcaatctgtctgaga 232
           | ||||       ||| |||||||||||| |||||||| |||| |||||| | |||||||
Sbjct: 656 aagacgagagagatgataaatggttgcaatctgtagctgctgagttcaatatctctgaga 715

                                                                       
Query: 233 cctgctatttgactcgcattactgatggg---gaaactgtttcttcaaatcccaggttcc 289
           ||||||||||||| || ||  || ||      || |||||| |||| |||||||||||||
Sbjct: 716 cctgctatttgacccggatctctcatcactctgatactgttccttctaatcccaggttcc 775

                                                                       
Query: 290 atctcaggtggtttactcctgttgctgagattcgtctttgtggtcatgcgactctagcag 349
             || |||||||||||||||||||||||| ||   |||||||| ||||| || |||||||
Sbjct: 776 gcctgaggtggtttactcctgttgctgaggttaaactttgtggccatgcaacactagcag 835

                                                                       
Query: 350 cttcacacatactgttctctaatggctgggtaaattctagcacaattgaatttgtcacac 409
           ||||||| |   | || |||||||| | ||||||||||  ||  ||||| |||| |||  
Sbjct: 836 cttcacataccatcttttctaatggtttggtaaattctgacattattgagtttgacacct 895

                                                   
Query: 410 tatctgggtttctaattgctaagaaagttactgaaatcag 449
           |||||||  ||||||  |||||||| ||| ||||||||||
Sbjct: 896 tatctggtattctaacagctaagaaggtttctgaaatcag 935


>29647.m002111 phenazine biosynthesis protein, putative
          Length = 903

 Score =  103 bits (52), Expect = 9e-22
 Identities = 139/168 (82%)
 Strand = Plus / Plus

                                                                       
Query: 190 aaatggttgcaagctgtagctactgaattcaatctgtctgagacctgctatttgactcgc 249
           |||||||||||| |||||||| | || || || || || |||||||||||||||||||||
Sbjct: 106 aaatggttgcaatctgtagctgccgagtttaacctctccgagacctgctatttgactcgc 165

                                                                       
Query: 250 attactgatggggaaactgtttcttcaaatcccaggttccatctcaggtggtttactcct 309
           || |||||    || |||  |  ||||||||||||||||||||| || ||||||||||||
Sbjct: 166 atcactgactctgacactaatagttcaaatcccaggttccatcttagatggtttactcct 225

                                                           
Query: 310 gttgctgagattcgtctttgtggtcatgcgactctagcagcttcacac 357
           ||  ||||| ||   || ||||||||||| || |||||||||||||||
Sbjct: 226 gtctctgaggttgagctatgtggtcatgcaacactagcagcttcacac 273