Jatropha Genome Database
- JcCB0130701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0130701.10 - phase: 0 /partial
(817 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013798 26S proteasome non-atpase regulatory subunit, puta... 930 0.0
>30147.m013798 26S proteasome non-atpase regulatory subunit,
putative
Length = 1161
Score = 930 bits (469), Expect = 0.0
Identities = 700/777 (90%)
Strand = Plus / Plus
Query: 1 atggaagggcaagaaggaactcagcaaccgcacctcgtgctcgcacacaagcgcttcctc 60
|||||||| ||||| |||||||| |||||||||||| | || || ||||||||||||||
Sbjct: 1 atggaaggtcaagagggaactcaacaaccgcacctcatccttgctcacaagcgcttccta 60
Query: 61 ctaactcaccccgatgttcaagacattgagaaggtccgcctcaaggaggaggtcttcgcg 120
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 ttaacacaccccgatgtccaagacattgagaaggtccgcctcaaggaggaggtctttgct 120
Query: 121 gccgtcaaagacgacgatatggcgccgttgtacgaaaccctaatggccgaaggaatactg 180
||||| ||| ||||||||||| || ||||||||||||||||| ||||||| | |||
Sbjct: 121 gccgttaaatctgacgatatggctcccttgtacgaaaccctaatcaccgaaggtttgctg 180
Query: 181 gacaaagatcagagcgttttggattcgatgcgtgccaagaatgaggaggagctcaagaag 240
|| |||||||| ||| ||||||||| ||||||||| ||||||||||| ||||| ||||||
Sbjct: 181 gaaaaagatcaaagcattttggatttgatgcgtgctaagaatgaggacgagcttaagaag 240
Query: 241 ctcgatgagaagattgctgatgctgaagaaaacttgggtgaaagtgaagttcgagaagct 300
| |||||||||||||| ||||||||||||||||| || ||||| || ||| |||||||
Sbjct: 241 attgatgagaagattgccgatgctgaagaaaacttaggagaaagcgaggttagagaagcc 300
Query: 301 catttggccaaatctttgttcttcattcgaattggtgacaaggaaaaagcattggaacaa 360
|||||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||
Sbjct: 301 catttggccaaatctttgttctacattcggattggtgacaaggagaaagcattagaacaa 360
Query: 361 atgaaagtgacagaaagcaagacagttgctgttgggcaaaagatggacttggtattctat 420
||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 361 ctgaaagtgacagaaagcaaaaccgttgcggttgggcaaaagatggacttggtattctat 420
Query: 421 actttacagcttggctttttctacatggattttgatctcatttccaagagcattgacaaa 480
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgttacagcttggttttttctacatggattttgatctcatttccaagagcattgacaaa 480
Query: 481 gcaaagaacttgtttgaagagggaggtgattgggaaaggaagaaccggttgaaggtgtat 540
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 481 gcaaaaaacttgtttgaagagggaggtgactgggaaaggaagaaccgattgaaggtgtat 540
Query: 541 gagggcttatattgcatgtccactcgaaatttcaagaaggcagctaatctgtttttggat 600
|||||||| ||||||||||| ||||||||||||| |||||||| | | | |||||||||
Sbjct: 541 gagggcttgtattgcatgtctactcgaaatttcacaaaggcagccactttatttttggat 600
Query: 601 tctatttcaaccttcactacctatgaactttttccttatgacaccttcatattttacact 660
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 601 tccatttcaaccttcactacctatgaacttttcccttatgataccttcatattttacacc 660
Query: 661 gttcttacaagcattatatcattggatagagtttccctgaagcaaaaggttgttgatgct 720
|| || |||||||||||| ||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 661 gtcctcacaagcattataacattggatagagtctccctgaagcaaaaggtagtggatgct 720
Query: 721 cctgagatcttgacagtgattgggaagatcccatatctttctgagtttctaaattct 777
|||||||||||||||||||||||||| || || |||||||| || || |||||||||
Sbjct: 721 cctgagatcttgacagtgattgggaaaattccgtatctttcagaattcctaaattct 777