Jatropha Genome Database
- JcCB0129761.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0129761.20 - phase: 2 /partial
(1186 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003677 Pectinesterase-1 precursor, putative 157 2e-37
>29739.m003677 Pectinesterase-1 precursor, putative
Length = 1800
Score = 157 bits (79), Expect = 2e-37
Identities = 223/271 (82%)
Strand = Plus / Plus
Query: 705 ttgatggtggctttcctatgtgggtccacaggagggataggagattgctggtagaggaga 764
|||||| ||| ||||| || |||||||||| ||||| |||||||| || | |||||||
Sbjct: 812 ttgatgctgggtttcccatatgggtccacatcagggacaggagatttctactggaggaga 871
Query: 765 aaccaaaaccaaatgtaacagtagcatgggatggcagcggggattttaagaccataaatg 824
|||| ||||| ||| |||||||||| |||||||| || |||||||||||||||||||| |
Sbjct: 872 aacccaaacccaatctaacagtagcttgggatggaagtggggattttaagaccataaaag 931
Query: 825 aggcagtgaagtcaattcctaagaagagcaagtcaagatttataatatatgtaaaagagg 884
|||||||| | || |||||||| | ||||||||| |||||| ||||| || |||||||
Sbjct: 932 aggcagtggaatccattcctaaaagaagcaagtcacaatttattatatacgtgaaagagg 991
Query: 885 gattatatgtcgggaatgtgacagtgaggaaggcttattggaatgttatgatttatggtg 944
| || || | | |||||||||| | ||| |||||||||||| |||||||| ||||
Sbjct: 992 gtttgtacttagagaatgtgacaatagataagaattattggaatgtcatgatttacggtg 1051
Query: 945 atggaatggagaagaccattatctccgccag 975
|||||||| | | ||||||| ||||||||||
Sbjct: 1052 atggaatgaataggaccattgtctccgccag 1082
Score = 125 bits (63), Expect = 6e-28
Identities = 168/203 (82%)
Strand = Plus / Plus
Query: 494 aggacttggctaagcacagccatagctgatcaagaaacgtgcatagatgcactacaggaa 553
|||||||||||||||||||||||| | ||||||||||| |||||||||| || ||||
Sbjct: 568 aggacttggctaagcacagccataacagatcaagaaacatgcatagatgggttaaaggag 627
Query: 554 actgggaagcaccagatcataactaaagaggtgagacatgctatgagtaactccaccaag 613
| |||||||||| || | | ||||| ||||| ||| | |||||||| |||||||| ||
Sbjct: 628 gccgggaagcacctgaccctgactaatgaggttagatacgctatgagcaactccactgag 687
Query: 614 ttcatcagtaacagcttggcaattgcttgtaatatattgaccattcttaatgatcacaac 673
|||| |||||||| ||||||||||||| | | |||||||| ||||| |||||| | |
Sbjct: 688 ttcacaagtaacagtttggcaattgcttccattgtattgaccgttcttgatgatctccaa 747
Query: 674 atcccaattcatcggaaactttt 696
|||||||||||||| | ||||||
Sbjct: 748 atcccaattcatcgcagactttt 770
Score = 85.7 bits (43), Expect = 6e-16
Identities = 115/139 (82%)
Strand = Plus / Plus
Query: 1023 agtttcggaattttgggcctggctcggttatagatggaagagttggctggcctggtgtta 1082
|||||||||||||||||||||| || | | || |||||||| | |||||||||||||
Sbjct: 1634 agtttcggaattttgggcctggatccatgacagggagaagagttagatggcctggtgtta 1693
Query: 1083 gacccaatatctcgttagaagaggcagagaaatttacagtggaacattttattcagggaa 1142
| || |||||| | | |||||||||||||||||| ||||||| ||| || || || |
Sbjct: 1694 ggcctaatatcacatatgaagaggcagagaaatttgcagtggagagtttcatacatggga 1753
Query: 1143 gccagtggctgccacaagc 1161
|||||||||||||||||||
Sbjct: 1754 gccagtggctgccacaagc 1772
Score = 56.0 bits (28), Expect = 5e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 15 cagaggaggcatttcggcggaaatcccgcaaacgactcatcatcattg 62
|||||||||||||||||||||| |||| ||||| ||||| |||||||
Sbjct: 65 cagaggaggcatttcggcggaagacccgtaaacgtctcatgatcattg 112