Jatropha Genome Database
- JcCB0129341.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0129341.10 - phase: 0
(2184 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30185.m000956 Auxin response factor, putative 1136 0.0
>30185.m000956 Auxin response factor, putative
Length = 3330
Score = 1136 bits (573), Expect = 0.0
Identities = 1505/1823 (82%), Gaps = 57/1823 (3%)
Strand = Plus / Plus
Query: 1 atgccttggcttggtgatgatatgtacatgaaagatccccattctctacctggcctgagc 60
||||||||||| ||||||||||| |||||||| |||||||| ||||| ||||||||||||
Sbjct: 1225 atgccttggctgggtgatgatatctacatgaaggatccccaatctctccctggcctgagc 1284
Query: 61 ttagtccagtggatgaacatgcagcaaaacccttcccttgctaattcactgcagcccaat 120
||| | |||||||||||| |||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1285 ttaatgcagtggatgaacttgcagcaaaatccttcccttgctaattcaatgcagcccaat 1344
Query: 121 tacatgcaatccttgtcgggatctgttctgcagaaccttcctggggctgatctttcccgt 180
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1345 tacatgcaatccttgtcaggatctgttctgcagaaccttgctggggctgatctttcccgt 1404
Query: 181 cagttaggcttgtcagcacaacaattgcctcagccaaacaacttacagttcaatgcccag 240
||||||||||| ||||| | |||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 1405 cagttaggcttttcagctccacaattacctcagtcaaacaacttacaattcaatgcccag 1464
Query: 241 cggctgccccagcaagcacagcagcttgatcagcttccaaagctgcaatcctcactaaat 300
|| ||||| ||||||||||||| ||||||||||||||| |||||||| || | ||| ||
Sbjct: 1465 cgtctgcctcagcaagcacagctgcttgatcagcttcccaagctgcagtcattactgaac 1524
Query: 301 ccactaggttccatcattcagtcacagcaccagttaggtgacatcactcaacaaccgagg 360
||||||||| ||||||| ||||| ||||| ||||| ||||| | | |||||||| | |||
Sbjct: 1525 ccactaggtaccatcatccagtcgcagcaacagttgggtgatacctctcaacaatcaagg 1584
Query: 361 caaaatttggtaactcaaaccataccgtcaagtcaagttcaaccccaaaatctgcagcca 420
|| ||||||| ||| |||| ||||||||||||||||||||| | |||| |||||||||
Sbjct: 1585 cagaatttggcaacacaaaatataccgtcaagtcaagttcaagctcaaattctgcagcct 1644
Query: 421 caaactctagcccaaaacactaacattcttcagcaacagccatctcttcaaagccatcag 480
|||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 1645 caaactctagtccaaaatactaacatgcttcagcaacagccatctcttaaaagccatcag 1704
Query: 481 cttcctagaaacatttctcagaacctgcagcaacagcagcagaatcaacagcagcatatt 540
|||||||||||| |||||| | ||||||| |||||||||| ||||||||||||||||
Sbjct: 1705 cttcctagaaaccaccctcagagcatgcagcagcagcagcagagtcaacagcagcatatt 1764
Query: 541 atgggacagaaccaacagcaaagtttattgcaaactcagttgcctgatcaagtaacccaa 600
||||| ||||||||||||| || | || | ||| ||||||||||||||||||| | ||||
Sbjct: 1765 atgggtcagaaccaacagccaaatgtaatacaatctcagttgcctgatcaagtcagccaa 1824
Query: 601 catttacaaatgcctgacaatcagattcagcttcagctgttgcagaagcttcaacagcaa 660
|||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 1825 catttacaaatgtctgacaatcagtatcagcatcaactgttgcagaagcttcaacagcaa 1884
Query: 661 cagcaatcgcttttgtcgcagcagtctgtattgcaacaacctagtcaattttcacagctt 720
||||| || ||||| | |||||| |||||||||||||||||||||| ||||||
Sbjct: 1885 cagcagtcacttttagctttgcagtc---attgcaacaacctagtcaatttatgcagctt 1941
Query: 721 caggatccacaaaggcagtttttagaggcatccaagagctttgcaaggtccatgccagcc 780
|||||||||||||||||| | ||||||||||| ||| ||| ||||| ||| | ||
Sbjct: 1942 caggatccacaaaggcagctgttagaggcatctcagaccttctcaaggcccacactgccc 2001
Query: 781 aatcaactattagaaatgcctcaaacaactcctgcctcgcttcctcagtcaaatattatt 840
|||||| | |||||||||||||||||| || |||| |||||||||||||| ||||
Sbjct: 2002 aatcaattgccagaaatgcctcaaacaacacccacctcacttcctcagtcaaa---tatt 2058
Query: 841 caacagcagatgacaaagaatggcaaccagactaatgcccggctctcacatatgccacag 900
|||||||| |||||||||||| ||| |||||| | || ||| |||| || |||| |||
Sbjct: 2059 caacagcaaatgacaaagaatagcagccagacaagtggtcggttctctcaattgcctcag 2118
Query: 901 cagctgaaattccaacaacagcagcctggcacactgtctgaaatgcctggacatatgggc 960
||||||||||| |||||||||||||||| ||| ||||||||| |||| |||||||
Sbjct: 2119 cagctgaaatt---tcaacagcagcctggcatactatctgaaatggctggtgatatggga 2175
Query: 961 cttaccacaagctcagttgtcaatcactcagttgccaatcatctctctattgctggtaat 1020
||| | ||||||||| | | ||||| | ||||| || |||| |
Sbjct: 2176 cttcctccaagctcagctat---------------taatcagcactctacagccggtagt 2220
Query: 1021 attatattaacttcagctgcaggagcaggtctgtctggaattactgaggaggtcccatct 1080
| |||||| | |||||||||||||||| | ||||| ||||||||||||| ||||||
Sbjct: 2221 agtatattgtgtgcagctgcaggagcaggcttatctggggttactgaggaggttccatct 2280
Query: 1081 tgttcaacttcaccttccacaaacaattgtgcgaatttggttcaacca---atgaacagt 1137
||||| || ||||||||||||||||| | ||| ||| ||||| ||| |||| ||||
Sbjct: 2281 tgttccacgtcaccttccacaaacaactttgctaatgcagttcagccaatgatgagcagt 2340
Query: 1138 cgggtgcatcaaaacacagttttgggagatgacgcggctcagtctgctgcaacactccta 1197
| | || |||| ||| | || || ||| |||||||||||| ||||||||| |
Sbjct: 2341 cttgctcaccaaagcactacactaggggaagacatggctcagtctgcggcaacactcttg 2400
Query: 1198 agtcccaatgccttagaaacaatgtcatgcagtgctaacttggttaaagatttgcaacag 1257
||||| |||||||||| | || ||||||| ||||||| | |||||||| | ||||||
Sbjct: 2401 agtcctggtgccttagaaccgatttcatgcaatgctaacataattaaagatatacaacag 2460
Query: 1258 aaatctgatgttaagccctcattgaacattgccaagaatcaaagccaaggattctttcct 1317
||||| ||| ||||||||||||||||||| ||||| |||||| ||||||||||||| |
Sbjct: 2461 aaatcagatattaagccctcattgaacatgaccaagcatcaaaaccaaggattctttacc 2520
Query: 1318 ccacaaacgtacctaaatggtgcaactgcccaggcagattatttggatacgtcttcttct 1377
|||||||| || | |||| |||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 2521 ccacaaacatatttgaatgctgcaactgtgcagacagattttttggatacttcttcttct 2580
Query: 1378 acaacttcagtttgtgtttctcagaatgatgtccatttgcagcagaacaactcatcttca 1437
||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 2581 acaacttcagtttgtgtttctcagaat------------------aacaactcttcgtca 2622
Query: 1438 tacaatccacaatcaatgttgttgagagacacaagccaagatggggagctccaggcagat 1497
| |||||||||||||||||| |||||||||||| |||||||||||| |||| |||||||
Sbjct: 2623 tgtaatccacaatcaatgttgctgagagacacaaaccaagatggggaactcccggcagat 2682
Query: 1498 attaggaatagtgttccatatggtactaatgttgaaagccagttgggcgtacctatgaac 1557
||||| | |||||||||||| ||||||||| |||| | || ||| || ||||
Sbjct: 2683 cccaggaacaatgttccatatggatctaatgttggtggccaagtaggggtatctttgaat 2742
Query: 1558 tctgataatgtgttgtcagaaggcgttataggtttgggaaaagacttaccaaacaatctc 1617
||||| ||| |||| || |||| || |||||||||| || || || |||| ||||||
Sbjct: 2743 tctgaccatgggttgacaaaaggaattgtaggtttgggtaaggatttctcaaataatctc 2802
Query: 1618 tcgtcaggttgtatgcttgctaactgtgaaaactcaaaagatgctc------------ca 1665
|| ||||| | ||||||||||||||||||||| |||| ||| ||| |
Sbjct: 2803 tcctcagggggcatgcttgctaactgtgaaaacgcaaaggatcctcaaaatgagctgtcc 2862
Query: 1666 tcttcaatggtttcccagtcatttggagttccagatatggcattcaattcaatcgactcc 1725
|||||||||||||| ||||||||||||||||| ||||||||||||||||| || || |||
Sbjct: 2863 tcttcaatggtttctcagtcatttggagttcccgatatggcattcaattctattgattcc 2922
Query: 1726 acaatcaatgatagcagcttcttgaacagaggtccttgggcccctccaccacagtttcag 1785
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2923 acaatcaatgatagcagcttcatgaacagaggtccttgggcccctccaccacagtttcag 2982
Query: 1786 cgaatgcgaacatatacaaaggt 1808
||||||| || || ||||||||
Sbjct: 2983 agaatgcggacctacacaaaggt 3005
Score = 355 bits (179), Expect = 7e-97
Identities = 284/319 (89%)
Strand = Plus / Plus
Query: 1861 tacaaacgcggagctgtgggaaggtcaattgatataacccggtattcagattatgatgag 1920
|||||||| |||||||| ||||||||||| ||||||||||| ||||||| |||| ||||
Sbjct: 3007 tacaaacgtggagctgtcggaaggtcaatcgatataacccgttattcaggatatgttgag 3066
Query: 1921 cttaagcaagacctggctcggaggtttggtatagagggacagttggaagacagacagagg 1980
||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 3067 cttaagcaagatctggctcggaggtttggcatagagggacagttggaagatcgacagaga 3126
Query: 1981 ataggctggaagcttgtctatgtggatcatgaaaatgatgtcctgttagttggggatgat 2040
||||||||||| ||||| ||||| |||||||| ||||||||||| |||| ||||||||
Sbjct: 3127 ataggctggaaacttgtttatgttgatcatgagaatgatgtccttctagtaggggatgac 3186
Query: 2041 ccatgggaagagtttgtgaactgtgtccgctgcattaagatcctatcgcctcaggaagtc 2100
||||||||||||||||||||||||||||| ||||| |||||| | || ||||| ||||||
Sbjct: 3187 ccatgggaagagtttgtgaactgtgtccgttgcatcaagatcttgtctcctcaagaagtc 3246
Query: 2101 cagcaaatgagcttggatggagactttgggaattctgtctttccaaatcaagcatgcagc 2160
||||| ||||||||||||||||| |||||||| |||| | ||||||||||||| || |||
Sbjct: 3247 cagcagatgagcttggatggagattttgggaactctggccttccaaatcaagcttgtagc 3306
Query: 2161 agctcggataatggcaatg 2179
|| || |||||||||||||
Sbjct: 3307 agttctgataatggcaatg 3325