Jatropha Genome Database
- JcCB0128961.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0128961.10 + phase: 1 /pseudo/partial
(512 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29680.m001711 DNA binding protein, putative 389 e-107
29637.m000753 transcription factor, putative 139 2e-32
30169.m006598 transcription factor, putative 84 9e-16
>29680.m001711 DNA binding protein, putative
Length = 1380
Score = 389 bits (196), Expect = e-107
Identities = 247/264 (93%)
Strand = Plus / Plus
Query: 8 aagcttggtggtagtgaacgagctactccaaagggtgtcttaaagctcatgaatgttgag 67
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 754 aagctcggtggtagtgaacgagctaccccaaagggtgtcttaaagctcatgaatgttgaa 813
Query: 68 ggcttgaccatctaccatgttaaaagccacttgcagaagtacagaacggcaagatataaa 127
|||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||
Sbjct: 814 ggcttgaccatctaccatgttaaaagccacctgcaaaagtacagaacagccagatataag 873
Query: 128 ccagagtcatctgaaggatcttcagagaaaaagttgaatcctattgatgaaatgaaatct 187
|||||||| |||||||| | |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 874 ccagagtctgctgaaggaacatcagagaaaaagttgagtcccattgatgaaatgaaatct 933
Query: 188 cttgacttgaaaacgagcatggggatcactgaagcattgcgattgcaaatggaggttcag 247
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 ctagacttgaaagcgagcatggggatcactgaagcattgcgattgcaaatggaggttcag 993
Query: 248 aagcgactccatgaacagcttgag 271
||||| ||||||||||||||||||
Sbjct: 994 aagcggctccatgaacagcttgag 1017
Score = 54.0 bits (27), Expect = 8e-07
Identities = 105/131 (80%)
Strand = Plus / Plus
Query: 374 tgcactggaagaaagtttccaaagtgtaagcaaaaagcaaaaggtccaggaaaacaaaac 433
||||||||||| ||||| |||| || ||||| ||||||||||| | ||||||| |||
Sbjct: 1239 tgcactggaaggaagttctcaaaatggaagcagaaagcaaaaggcaccagaaaacagaac 1298
Query: 434 ttgtaagggttttgacccagaagacaatgagtgtagtccagcatctgcaaagcgaccgag 493
| || | | | ||||||||||||| |||| | | |||||||||| |||||||| || ||
Sbjct: 1299 tggtgaagatcttgacccagaagatgatgaatctggtccagcatcagcaaagcggccaag 1358
Query: 494 aacggatgaaa 504
| | |||||||
Sbjct: 1359 agcagatgaaa 1369
>29637.m000753 transcription factor, putative
Length = 1476
Score = 139 bits (70), Expect = 2e-32
Identities = 163/194 (84%)
Strand = Plus / Plus
Query: 9 agcttggtggtagtgaacgagctactccaaagggtgtcttaaagctcatgaatgttgagg 68
||||||||||||||||||||||||||||||| ||||| | ||||||||||| ||||| |
Sbjct: 848 agcttggtggtagtgaacgagctactccaaaaggtgtgctgaagctcatgaaagttgaag 907
Query: 69 gcttgaccatctaccatgttaaaagccacttgcagaagtacagaacggcaagatataaac 128
||||||| || || |||||||||||||||||||| || ||||| || || ||||| | ||
Sbjct: 908 gcttgactatttatcatgttaaaagccacttgcaaaaatacaggacagccagatacagac 967
Query: 129 cagagtcatctgaaggatcttcagagaaaaagttgaatcctattgatgaaatgaaatctc 188
|||| |||| |||||||| |||||| |||| |||| |||| | || ||||| || |
Sbjct: 968 cagactcattagaaggatcctcagagcaaaaattgactcctttagaagaaatatcctcac 1027
Query: 189 ttgacttgaaaacg 202
||||||||||||||
Sbjct: 1028 ttgacttgaaaacg 1041
>30169.m006598 transcription factor, putative
Length = 1611
Score = 83.8 bits (42), Expect = 9e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 32 actccaaagggtgtcttaaagctcatgaatgttgagggcttgaccatctaccatgttaaa 91
||||||||||||||||||||||| ||||||||||| || |||||||| || ||||| |||
Sbjct: 1024 actccaaagggtgtcttaaagctaatgaatgttgaaggtttgaccatatatcatgtgaaa 1083
Query: 92 agccacttgcagaa 105
||||| || |||||
Sbjct: 1084 agccatttacagaa 1097