Jatropha Genome Database

JcCB0128761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0128761.10 - phase: 0 
         (564 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m004044 sensory transduction histidine kinase, putative         511   e-144

>30138.m004044 sensory transduction histidine kinase, putative
          Length = 1653

 Score =  511 bits (258), Expect = e-144
 Identities = 363/398 (91%)
 Strand = Plus / Plus

                                                                       
Query: 64  attgatagaagtaaagtgaggattctgctatgcgataatgattccaagagctgtgaggaa 123
           ||||||||||| |||||  ||||| || |||| |||||||||||||| ||||  ||||||
Sbjct: 49  attgatagaagcaaagtacggattttgttatgtgataatgattccaaaagctccgaggaa 108

                                                                       
Query: 124 gtttttacactgcttttgaagtgctcttatcaggttacatcagtgagatcagctaggcag 183
           |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gtttttactcttcttttgaagtgctcttatcaggttacatcagtgagatcagctaggcag 168

                                                                       
Query: 184 gtgattgatgcgctgaatgccgagggacctgctattgatatcatacttgctgaagttgac 243
           |||||||||||  | |||||||||||||| | |||||||||||||||| |||||||||||
Sbjct: 169 gtgattgatgcattaaatgccgagggacccgatattgatatcatactttctgaagttgac 228

                                                                       
Query: 244 cttccaatgaacaaaggcatgaagttgctgaagtacatcacacgggataaagagttgcgt 303
           |||||||||||||||||||||||| || |||| || |||||||||||||||||||| || 
Sbjct: 229 cttccaatgaacaaaggcatgaagatgttgaaatatatcacacgggataaagagttacgg 288

                                                                       
Query: 304 cgcattcctgtgatcatgatgtcggcacaggacgaggtctcaattgtcgttaagtgcttg 363
           ||||||||||| |||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 289 cgcattcctgttatcatgatgtcggcacaggatgaagtctccattgttgtcaagtgcttg 348

                                                                       
Query: 364 aggttaggagcagcagactatcttgtaaagcctttacgcactaatgagctattgaacctg 423
           ||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||| 
Sbjct: 349 aggttaggagccgcagactatcttgtaaagcctctacgtacaaatgagctattgaaccta 408

                                                 
Query: 424 tggacacacatgtggagaaggaggcgcatggttggttt 461
           |||||||||||||||||||||||||||||| |||||||
Sbjct: 409 tggacacacatgtggagaaggaggcgcatgcttggttt 446