Jatropha Genome Database
- JcCB0126391.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0126391.10 - phase: 1 /partial
(1781 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004544 conserved hypothetical protein 256 4e-67
>30076.m004544 conserved hypothetical protein
Length = 1821
Score = 256 bits (129), Expect = 4e-67
Identities = 393/481 (81%)
Strand = Plus / Plus
Query: 107 aagaactgaaactttgagaatgaaactatgggagatattgggcactgtttcttcacctag 166
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 594 aagaactgaaactttgagaatgaaactatgggagatactgggaactgtttcttcacctag 653
Query: 167 aagtcagccttctcattccctggctcctgaggcatgtgctaataatttaaagcaagagca 226
||||||||| ||| |||| | ||||| ||| | | |||||||||||| ||||| ||| |
Sbjct: 654 aagtcagccctctaattctcaggctcgtgatgaaggtgctaataattcaaagctggagaa 713
Query: 227 agtacatcaacaaaagggtgatggagttgtaaagcaaatacagaattctgataccataga 286
| |||||| ||||| ||||||| |||| | |||| ||||||||||| |||||||| ||
Sbjct: 714 atcacatcatcaaaatggtgatgcagttatcaagcctatacagaattcggataccattga 773
Query: 287 aactgattctgaaaatcctgataatacaatgaagagacctgtaacacgttcttcaagtcg 346
|||||||||||||||||||||| |||||||||||||||| | ||| ||||||| | |
Sbjct: 774 aactgattctgaaaatcctgatcatacaatgaagagaccagcaactcgttctttgaccca 833
Query: 347 aaggaaagtttcaacgaaaatacaaccaaagaaaacgaaaactggccagtcaactctttc 406
|| | |||| || ||| ||||||| || || |||||||||| ||| || ||
Sbjct: 834 aaatatagttaaaagcaaagcacaaccagtaaagactaaaactggcccatcatctagtta 893
Query: 407 taaactgaaacttcaggagaagagtatattctccttcgaagatggattgcataggaaagg 466
| | ||||||| ||||||| ||| |||||||| ||||| ||||||| | | |||||
Sbjct: 894 cagaaacaaacttcctgagaagaatatcttctcctttgaagaaggattgcttggaaaagg 953
Query: 467 agatgctgctatcagtggtggctcctcaatgtcagcaagaaacaagggcaggagaaagaa 526
||| | |||| ||| |||||| ||||||||||| | |||||| ||||| | |||||||
Sbjct: 954 agacggtgctgtcaatggtggttcctcaatgtctggaagaaagaagggtggcagaaagac 1013
Query: 527 ttatgtcattgagccacgtaagattcacttcactgagaacaacagcgcagatgagattca 586
||||| |||||| |||| |||||||||||||| |||||| |||| ||||||| ||||||
Sbjct: 1014 ttatggcattgaaccacataagattcacttcagtgagaagaacaatgcagatgggattca 1073
Query: 587 g 587
|
Sbjct: 1074 g 1074
Score = 89.7 bits (45), Expect = 5e-17
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 865 ttatggagccacaggatgaatttgaaagcccaacattcagagtaaatactcctacgttaa 924
||||||| |||||||||||||| |||| |||||||| ||| ||| |||||||| |||||
Sbjct: 1352 ttatggatccacaggatgaattccaaagtccaacatttagaataagtactcctatgttaa 1411
Query: 925 gatcttcccctagctcaacgccaaa 949
| ||||||||||||||||| |||||
Sbjct: 1412 gctcttcccctagctcaacaccaaa 1436