Jatropha Genome Database

JcCB0125821.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0125821.20 - phase: 0 /partial
         (303 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003510 alkaline phytoceramidase, putative                      254   3e-67
29904.m002905 alkaline phytoceramidase, putative                       88   3e-17

>29842.m003510 alkaline phytoceramidase, putative
          Length = 768

 Score =  254 bits (128), Expect = 3e-67
 Identities = 236/272 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  atacagaagatgcctctgccaagcgacttgcaaaactgtatgtggctacccttttcactg 76
           ||||| |||||||  |||||||| | || || || |||||||||||||| ||||||| ||
Sbjct: 482 atacacaagatgctgctgccaagtggctagcgaagctgtatgtggctacgcttttcattg 541

                                                                       
Query: 77  gtagtttaagttggcttttcgatcggatcttttgcaagaacatatcaaattggcccatca 136
           |||||||  |||||||||  ||||| || || |||||||| |||||||| ||||||||||
Sbjct: 542 gtagtttgtgttggctttgtgatcgtattttctgcaagaagatatcaaactggcccatca 601

                                                                       
Query: 137 atccgcaaggacatgctttgtggcatgtctttatgggttttaattcctattttgcaaaca 196
           | || || ||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 602 acccacagggacatgctttgtggcatgtctttatgggttttaattcctacttcgcaaaca 661

                                                                       
Query: 197 cattcttgatgttttgccgtgcccatcagcgaggatgggcaccaaaggttggctattttg 256
           | ||||||||||||||||| ||  | |||||||||||| |||||||||||| || |||||
Sbjct: 662 cgttcttgatgttttgccgggcagagcagcgaggatggtcaccaaaggttgtctgttttg 721

                                           
Query: 257 gtggtgttcttccatatgtgaagattgagaaa 288
             ||| ||||||| ||||||||||||||||||
Sbjct: 722 ccggtattcttccgtatgtgaagattgagaaa 753


>29904.m002905 alkaline phytoceramidase, putative
          Length = 705

 Score = 87.7 bits (44), Expect = 3e-17
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 ccgcaaggacatgctttgtggcatgtctttatgggttttaattcctattttgcaaacaca 198
           ||||| ||||||||||| ||||||||| | ||||| || ||||| |||||||||||||||
Sbjct: 541 ccgcagggacatgctttatggcatgtcctcatgggcttcaattcatattttgcaaacaca 600

                               
Query: 199 ttcttgatgttttgccgtgc 218
           ||| |||||||||| |||||
Sbjct: 601 ttcctgatgttttgtcgtgc 620