Jatropha Genome Database
- JcCB0125511.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0125511.10 - phase: 0 /pseudo
(695 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29726.m003894 spermine synthase, putative 662 0.0
29739.m003604 Spermidine synthase, putative 64 1e-09
>29726.m003894 spermine synthase, putative
Length = 1011
Score = 662 bits (334), Expect = 0.0
Identities = 541/610 (88%)
Strand = Plus / Plus
Query: 34 aatggtaaatgccattcatcacctaatggatatagaaagagttgctggtatgaagaagag 93
||||| ||| ||||| |||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 52 aatgggaaaggccatccatctccaaatggctacaggaagagttgctggtatgaagaagag 111
Query: 94 attgaagagaacttgagatggtgttttgctctcaatagtattttgcacacaggtgcttct 153
|||||||||||||| |||||||||||||| |||||||| |||||||| ||||| | |||
Sbjct: 112 attgaagagaacttaagatggtgttttgccctcaatagcattttgcatacaggagtctct 171
Query: 154 cagtatcaggacattgccctattagacacaaaaccatttggaaaggctttagtcattgat 213
|||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||
Sbjct: 172 cagtatcaggacattgccctgttggacacaaagccatttggaaaggctttagtgattgat 231
Query: 214 ggaaagcttcaaagtgcagaggtggatgaattcatctaccatgaatcccttgttcatcca 273
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 232 ggaaagcttcaaagtgcagaggtggatgaatttatctaccatgaatgccttgttcatcca 291
Query: 274 gctcttcttcatcattctaatccaaagagcatctttattatgggaggaggtgaaggttct 333
|| ||||||||||||| ||| |||||| |||||| || ||||||||||||||||| ||
Sbjct: 292 gcaattcttcatcattcaaattcaaagaccatcttcataatgggaggaggtgaaggatca 351
Query: 334 actgcaagagaaatactcagacacaggactgttgaaaaggttgtcatgtgtgatattgat 393
||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 352 actgcaagagaaatactgagacataggactgtggagaaggttgtcatgtgtgatattgat 411
Query: 394 gaggaagtggttgacttctgtaaggcatatttggttgtgaatagagaagctttttgcgac 453
||||| ||||| |||||||| ||||| || |||| |||||||||||||||||| || ||
Sbjct: 412 gaggaggtggtagacttctgcaaggcctacttggctgtgaatagagaagctttctgtgat 471
Query: 454 caaagactagagattatcataaatgatgccagaactgagctacagagcaggaaagaatgc 513
| |||| ||||||| || || ||||||||||| | ||||||| | |||||||||||||||
Sbjct: 472 ccaagattagagatcattatcaatgatgccaggaatgagctagaaagcaggaaagaatgc 531
Query: 514 tatgatcttatcattggagacttggctgacccaatcgaaggaggcccatgttacaagctc 573
|||||| | || || || || ||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 532 tatgatgtgataataggggatttggcagacccaatagaaggaggcccgtgttacaaactc 591
Query: 574 tacaccaaatccttctatgagttcactgttaaacccaaactcaatgaggctggcattttt 633
|||||||||||||| |||||||| ||||| ||||||| ||||||| ||| ||| ||||||
Sbjct: 592 tacaccaaatccttttatgagttaactgtcaaacccagactcaatcagggtgggattttt 651
Query: 634 gtcacacagg 643
||||||||||
Sbjct: 652 gtcacacagg 661
>29739.m003604 Spermidine synthase, putative
Length = 1020
Score = 63.9 bits (32), Expect = 1e-09
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 527 ttggagacttggctgacccaatcgaaggaggcccatgttacaagctctacaccaaatcct 586
||||||||||||||||||| |||||||||| || || || |||||||||| || ||||
Sbjct: 554 ttggagacttggctgaccctgtcgaaggagggccttgctatcagctctacacaaagtcct 613
Query: 587 tctatgag 594
||||||||
Sbjct: 614 tctatgag 621
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 367 gaaaaggttgtcatgtgtgatattgatgaggaagtggttgacttctg 413
||||| || |||||||||||||||||| |||||||||| || |||||
Sbjct: 394 gaaaaagtggtcatgtgtgatattgatcaggaagtggtggatttctg 440