Jatropha Genome Database
- JcCB0124931.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0124931.10 + phase: 0 /pseudo/partial
(933 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29610.m000406 adenylosuccinate lyase, putative 700 0.0
>29610.m000406 adenylosuccinate lyase, putative
Length = 1422
Score = 700 bits (353), Expect = 0.0
Identities = 515/566 (90%), Gaps = 6/566 (1%)
Strand = Plus / Plus
Query: 1 aatggatgaattgatcaaagcaatatgcaaaatggcccgaagataatgcttccattccga 60
|||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |
Sbjct: 453 aatggatgaattgatcaaagcaatatgcaacatggct-gaagataatgcttctgttccaa 511
Query: 61 tgctttc-cgcactcatggacagc----ttcacccacaactttgggaaaggaaatggcag 115
||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 512 tgctttctcgcactcatggacagccagcttcacctacaactttgggaaaggaaatggcag 571
Query: 116 tttttgctgtcaggttaagtgaacaaaggcaggaaatttctcaagttaagataaagggaa 175
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 572 tttttgctgctaggttaagcgaacaaaggcaggaaatttctcaagttaagataaagggga 631
Query: 176 agtttgctggtgctgttggaaattataatgcacatattgttgcatatccaaatgtcaatt 235
||||||||||||| |||||||||||||| || ||| ||||||||||||| | ||||| |
Sbjct: 632 agtttgctggtgcagttggaaattataacgcccatcttgttgcatatcctgaagtcaact 691
Query: 236 ggcctctaattgctaaagagtttgtggaatctcttggattgtatttcaatccctatgtta 295
||||||||||||||||||| ||||||||||| || ||| ||| || ||||| ||||| |
Sbjct: 692 ggcctctaattgctaaagaatttgtggaatccctaggactgtgctttaatccttatgtca 751
Query: 296 ctcagattgaaccacatgactatatggcaagactttttcaagcaattattgtatttaaca 355
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 752 ctcagattgaaccacatgactatatggcaagactttttcatgcaattatcacatttaaca 811
Query: 356 atatattgattgattttgatagagatatatggggctacatatccttagcatactttaagc 415
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 812 ctatattgattgattttgatagagatatatggggctacatagccttagcatacttcaagc 871
Query: 416 agataactaaagctggtgagattgggtcgtcaactatgcctcacaaagtaaatcctattg 475
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 872 agataactaaggctggggagattgggtcctcaactatgcctcacaaagtaaatcctattg 931
Query: 476 attttgaaaatagcgaaggtaatcttggtaaagccaatggagggttatctcatctcagtg 535
|||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||
Sbjct: 932 attttgaaaatagcgaaggtaatcttggaaaagccaatggaagtttatcccatctcagtg 991
Query: 536 agaagctaccgatttcacgctggcag 561
||||| | || |||||||| ||||||
Sbjct: 992 agaagttgcctatttcacgttggcag 1017
Score = 375 bits (189), Expect = e-103
Identities = 322/365 (88%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 560 aggaatatggg-gagggcttgggccattctcttcttgcttacagaagtgcattgcaagga 618
||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||| |||
Sbjct: 1045 aggaatatgggcgagggcttgggacattctcttcttgcctacaaaagtgcattgcaggga 1104
Query: 619 attggaaagcttcaggtgaatgaaagtcgcttaagtgaagacttgaaccactcatgggag 678
|| |||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 1105 ataggaaagctccaggtgaatgaaagtcgcttgagtgaagacttaaaccattcatgggag 1164
Query: 679 gtgcttgctgaaccaatacagactgtaatgcgccgttatggtgttccagagccttacgag 738
|||||||||||||| ||||||||||| ||||| || |||| ||||||||||||||| |||
Sbjct: 1165 gtgcttgctgaacctatacagactgttatgcggcgatatgatgttccagagccttatgag 1224
Query: 739 aagctaaaagaactaactaggggaagagctgttaccaaagaaagtataagagaattcatt 798
||||| ||||| || || ||||||||||||||||||||||||||| | || |||||||||
Sbjct: 1225 aagcttaaagagctgaccaggggaagagctgttaccaaagaaagtctgagtgaattcatt 1284
Query: 799 gaaggcttggaattgccaaaagaaacaaaggcttatcttttggaactgtcaccccataac 858
||||||||||||||||||||||||||||| || ||||||||| | || | |||||| |
Sbjct: 1285 gaaggcttggaattgccaaaagaaacaaaagcctatcttttgcagttgaccccccattcc 1344
Query: 859 tatgtgggagcagctattgaattgggtaaaaccgttgatgttactatgaatttaataaat 918
||||| |||| |||||||||||| | |||||| || || | || ||||||||| |||||
Sbjct: 1345 tatgttggagaagctattgaattagctaaaacggtgaatatcacaatgaatttagtaaat 1404
Query: 919 ggggt 923
|||||
Sbjct: 1405 ggggt 1409