Jatropha Genome Database
- JcCB0124301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0124301.10 + phase: 0 /partial
(450 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29983.m003121 nucleic acid binding protein, putative 375 e-103
30078.m002347 nucleic acid binding protein, putative 194 3e-49
28694.m000662 nucleic acid binding protein, putative 133 1e-30
30170.m014220 nucleic acid binding protein, putative 131 4e-30
29643.m000323 nucleic acid binding protein, putative 129 2e-29
29780.m001361 zinc finger protein, putative 123 1e-27
29794.m003304 nucleic acid binding protein, putative 119 1e-26
29883.m001956 nucleic acid binding protein, putative 113 9e-25
29647.m001996 nucleic acid binding protein, putative 96 2e-19
29780.m001362 nucleic acid binding protein, putative 84 8e-16
29646.m001073 nucleic acid binding protein, putative 80 1e-14
30128.m008805 nucleic acid binding protein, putative 72 3e-12
>29983.m003121 nucleic acid binding protein, putative
Length = 1314
Score = 375 bits (189), Expect = e-103
Identities = 306/345 (88%)
Strand = Plus / Plus
Query: 82 atggctacaaacagattcttatgtgaaatatgtggaaaagggtttcaaagagatcaaaat 141
|||||||| ||||||||||| |||||||||||||| ||||| || || |||||||| |||
Sbjct: 1 atggctaccaacagattcttgtgtgaaatatgtggcaaaggattccagagagatcagaat 60
Query: 142 ctgcagcttcatcgacggggtcataacctgccatggaagctaaagcaaaggactactaaa 201
|| ||||||||||| || || || || || ||||||||||| ||||||||||||| ||||
Sbjct: 61 ctacagcttcatcggcgagggcacaatcttccatggaagctcaagcaaaggactagtaaa 120
Query: 202 gaagcaagaaagcgcgtatacgtctgccctgaaaagtcttgtgtccatcaccatccctct 261
|||| |||||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 121 gaagtaagaaagcgcgtgtacgtctgccctgaaaagacctgtgtccatcaccatccttct 180
Query: 262 agggctcttggagatttaactggcattaaaaagcacttttgcagaaagcacggtgagaag 321
|| ||||| ||||| ||||||| || || |||||||||||||||||||| |||||||||
Sbjct: 181 agagctctcggagacctaactggaataaagaagcacttttgcagaaagcatggtgagaag 240
Query: 322 aagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgattggaaagcacac 381
|| |||||||| ||||| |||||||||||||| || || ||||| |||||||||||||||
Sbjct: 241 aaatggaagtgcgagaaatgttcaaagagatatgccgtgcagtcagattggaaagcacac 300
Query: 382 tccaaaacctgtggtactagagagtataaatgtgactgtggaact 426
|||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 301 tccaaaacctgtgggactagagagtacaaatgcgactgtggaact 345
>30078.m002347 nucleic acid binding protein, putative
Length = 1578
Score = 194 bits (98), Expect = 3e-49
Identities = 338/418 (80%)
Strand = Plus / Plus
Query: 9 aaagaagaaaagaaatcttccaggaacaccagatcctgaagcagaagttatagctttatc 68
||||||||| |||||| | ||||||||||||||||| || || |||||||| ||| ||||
Sbjct: 120 aaagaagaagagaaatttgccaggaacaccagatccagatgctgaagttattgctctatc 179
Query: 69 accaaaaactctaatggctacaaacagattcttatgtgaaatatgtggaaaagggtttca 128
|| |||||||| |||||||| ||| ||||| | ||||||||||| ||||| || ||
Sbjct: 180 tcctaaaactcttatggctacgaaccgattcatttgtgaaatatgcaataaaggtttcca 239
Query: 129 aagagatcaaaatctgcagcttcatcgacggggtcataacctgccatggaagctaaagca 188
|||||| ||||| ||||||||||| || | || |||||||| ||||||||||| |||||
Sbjct: 240 aagagaccaaaacttgcagcttcatagaagagggcataaccttccatggaagctgaagca 299
Query: 189 aaggactactaaagaagcaagaaagcgcgtatacgtctgccctgaaaagtcttgtgtcca 248
||| || | ||||| | | ||| || || | |||||||||||| |||| |||||
Sbjct: 300 aagaaccaacaaagaggttaagaagaaggtgtatatatgccctgaaaagacttgcgtcca 359
Query: 249 tcaccatccctctagggctcttggagatttaactggcattaaaaagcacttttgcagaaa 308
|| || |||| || ||||| |||||| | || || || |||||||||||| || | ||
Sbjct: 360 ccatgatgcctcgagagctctcggagatctcaccgggataaaaaagcactttagccggaa 419
Query: 309 gcacggtgagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctga 368
|| || ||||| || |||||||||||||| |||||||||| ||| || ||||| || ||
Sbjct: 420 acatggagagaaaaaatggaagtgtgagaaatgttcaaagaaatatgcagttcaatcaga 479
Query: 369 ttggaaagcacactccaaaacctgtggtactagagagtataaatgtgactgtggaact 426
|||||||| |||||||| || ||||| |||||||| |||||||||||||||||||||
Sbjct: 480 ctggaaagctcactccaagacttgtggcactagagaatataaatgtgactgtggaact 537
>28694.m000662 nucleic acid binding protein, putative
Length = 1659
Score = 133 bits (67), Expect = 1e-30
Identities = 336/425 (79%), Gaps = 3/425 (0%)
Strand = Plus / Plus
Query: 10 aagaagaaaagaaatcttccaggaacaccagatcctgaagcagaagttatagctttatca 69
|||||||| ||||| || ||||||| ||||| || || |||||||| |||||| |||||
Sbjct: 172 aagaagaagagaaacctaccaggaaacccagacccagatgcagaagtgatagctctatca 231
Query: 70 ccaaaaactctaatggctacaaacagattcttatgtgaaatatgtggaaaagggtttcaa 129
||||| ||| | ||||| ||||| ||||| ||||||| || ||| ||||||||||||
Sbjct: 232 ccaaagactttgatggcaacaaatagatttgtatgtgagatctgtaacaaagggtttcaa 291
Query: 130 agagatcaaaatctgcagcttcatcgacggggtcataacctgccatggaagctaaagcaa 189
|||||||| ||||| || || ||| || | || ||||| |||||||||||||||||||||
Sbjct: 292 agagatcagaatcttcaactccatagaagagggcataatctgccatggaagctaaagcaa 351
Query: 190 aggactactaaagaag---caagaaagcgcgtatacgtctgccctgaaaagtcttgtgtc 246
|| || | || |||| ||||||| || || || || || |||| |||||
Sbjct: 352 agaacaaacaaggaagtcataagaaagaaggtttatgtttgtccggaaactagctgtgtt 411
Query: 247 catcaccatccctctagggctcttggagatttaactggcattaaaaagcacttttgcaga 306
||||| | || || ||||| ||||| || | || || || ||||| |||||| |||||
Sbjct: 412 catcatgacccatcgagggcacttggtgacctgacaggaatcaaaaaacactttagcaga 471
Query: 307 aagcacggtgagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtct 366
||||| || |||||||||||||| ||||| ||||| ||||| || || || ||||| ||
Sbjct: 472 aagcatggcgagaagaagtggaaatgtgataagtgctcaaaaaggtatgcagttcaatca 531
Query: 367 gattggaaagcacactccaaaacctgtggtactagagagtataaatgtgactgtggaact 426
||||||||||| || ||||| |||||||| ||||| || || | |||||||||||||||
Sbjct: 532 gattggaaagctcattccaagacctgtggcactagggaatacagatgtgactgtggaacc 591
Query: 427 ctttt 431
|||||
Sbjct: 592 ctttt 596
>30170.m014220 nucleic acid binding protein, putative
Length = 1509
Score = 131 bits (66), Expect = 4e-30
Identities = 327/414 (78%)
Strand = Plus / Plus
Query: 9 aaagaagaaaagaaatcttccaggaacaccagatcctgaagcagaagttatagctttatc 68
||||||||| ||||| ||||| |||| |||||||| || || ||||| || ||||||||
Sbjct: 114 aaagaagaagagaaaccttcctggaatgccagatccagatgctgaagtgattgctttatc 173
Query: 69 accaaaaactctaatggctacaaacagattcttatgtgaaatatgtggaaaagggtttca 128
||||||||| || | || || ||||| ||| | ||||| || || ||||| |||||
Sbjct: 174 accaaaaacactgttagccacgaacaggttcgtgtgtgagatctgcaacaaaggctttca 233
Query: 129 aagagatcaaaatctgcagcttcatcgacggggtcataacctgccatggaagctaaagca 188
| | || || || || |||||||| || || ||||||||| | |||||||| ||||||||
Sbjct: 234 acgggaccagaacctccagcttcaccgtcgaggtcataacttaccatggaaactaaagca 293
Query: 189 aaggactactaaagaagcaagaaagcgcgtatacgtctgccctgaaaagtcttgtgtcca 248
| |||| |||||| ||| |||| | || ||||| ||||| ||| |||||||| ||
Sbjct: 294 gcgaactagtaaagagccaataaagagagtctacgtttgcccagaagcatcttgtgttca 353
Query: 249 tcaccatccctctagggctcttggagatttaactggcattaaaaagcacttttgcagaaa 308
||| |||| |||| ||||| || || || |||||||| || || ||||| ||||||||
Sbjct: 354 tcataatccagctagagctctcggtgacttgactggcatcaagaaacacttctgcagaaa 413
Query: 309 gcacggtgagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctga 368
||| || || ||||| ||||||||||| | ||| ||||||| ||| || || ||||| ||
Sbjct: 414 gcatggagaaaagaaatggaagtgtgaaaggtgctcaaagaaatatgcagtacagtcaga 473
Query: 369 ttggaaagcacactccaaaacctgtggtactagagagtataaatgtgactgtgg 422
||||||||| ||| || || ||||| |||||||||||||||||||| |||||
Sbjct: 474 ttggaaagcccacatgaagacttgtggcactagagagtataaatgtgattgtgg 527
>29643.m000323 nucleic acid binding protein, putative
Length = 1632
Score = 129 bits (65), Expect = 2e-29
Identities = 335/425 (78%)
Strand = Plus / Plus
Query: 10 aagaagaaaagaaatcttccaggaacaccagatcctgaagcagaagttatagctttatca 69
|||||||| |||||| | ||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 103 aagaagaagagaaatttaccaggaacaccagatccggatgcagaagttgtagctttatca 162
Query: 70 ccaaaaactctaatggctacaaacagattcttatgtgaaatatgtggaaaagggtttcaa 129
|||||| |||| ||||| |||||||||||| | || ||||| || || || ||||||
Sbjct: 163 ccaaaatctctcatggcaacaaacagattcctttgcgaaatctgcaacaagggttttcaa 222
Query: 130 agagatcaaaatctgcagcttcatcgacggggtcataacctgccatggaagctaaagcaa 189
||||| ||||| || || || ||| || | || || || || ||||||||| | |||||
Sbjct: 223 agagaccaaaaccttcaactccatagaagaggacacaatcttccatggaagttgaagcag 282
Query: 190 aggactactaaagaagcaagaaagcgcgtatacgtctgccctgaaaagtcttgtgtccat 249
|| | |||||||| | | |||| ||||| |||||||||||||| ||||| ||
Sbjct: 283 agatcgactaaagaggttaaaaagaaagtatatatctgccctgaaaagagctgtgtacac 342
Query: 250 caccatccctctagggctcttggagatttaactggcattaaaaagcacttttgcagaaag 309
|| |||| || || ||| | || || | || || || || ||||| ||| |||||||
Sbjct: 343 catgatccatcaagagctttaggtgacctgacaggaataaagaagcattttagcagaaaa 402
Query: 310 cacggtgagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgat 369
|| || || |||||||||||||||||||| |||||||||| ||| || ||||| || |||
Sbjct: 403 catggagaaaagaagtggaagtgtgagaaatgttcaaagaaatatgcagttcaatcagat 462
Query: 370 tggaaagcacactccaaaacctgtggtactagagagtataaatgtgactgtggaactctt 429
|||||||| || || | |||||| || |||||||||| |||||||||||| |||||
Sbjct: 463 tggaaagctcatagtaagatctgtggaaccagagagtatagatgtgactgtggcactctc 522
Query: 430 ttttc 434
|||||
Sbjct: 523 ttttc 527
>29780.m001361 zinc finger protein, putative
Length = 1716
Score = 123 bits (62), Expect = 1e-27
Identities = 143/170 (84%)
Strand = Plus / Plus
Query: 259 tctagggctcttggagatttaactggcattaaaaagcacttttgcagaaagcacggtgag 318
||||||||||| || || | |||||||| || || |||| || ||||| || ||||||
Sbjct: 400 tctagggctctcggtgaccttactggcatcaagaaacactattcaagaaaacatggtgag 459
Query: 319 aagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgattggaaagca 378
||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct: 460 aagaaatggaagtgtgagaaatgttcaaagaggtacgctgttcaatctgattggaaagcc 519
Query: 379 cactccaaaacctgtggtactagagagtataaatgtgactgtggaactct 428
|| || || || ||||| ||| ||||||| | |||||||||||| |||||
Sbjct: 520 cattctaagacttgtggcactcgagagtacagatgtgactgtggcactct 569
>29794.m003304 nucleic acid binding protein, putative
Length = 1341
Score = 119 bits (60), Expect = 1e-26
Identities = 120/140 (85%)
Strand = Plus / Plus
Query: 292 aagcacttttgcagaaagcacggtgagaagaagtggaagtgtgagaagtgttcaaagaga 351
|||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 268 aagcacttttgcagaaagcatggtgagaagaagtggaaatgtgaaaagtgctcaaaacgt 327
Query: 352 tacgctgttcagtctgattggaaagcacactccaaaacctgtggtactagagagtataaa 411
|| |||||||| || ||||||||||| |||||||| | || || || |||||||||| |
Sbjct: 328 tatgctgttcaatcagattggaaagctcactccaagatttgcggcacaagagagtataga 387
Query: 412 tgtgactgtggaactctttt 431
||||| |||||||| |||||
Sbjct: 388 tgtgattgtggaaccctttt 407
>29883.m001956 nucleic acid binding protein, putative
Length = 1401
Score = 113 bits (57), Expect = 9e-25
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 295 cacttttgcagaaagcacggtgagaagaagtggaagtgtgagaagtgttcaaagagatac 354
|||| ||||||||| || || || ||||| ||||||||||| || || ||||||| ||
Sbjct: 430 cactattgcagaaaacatggagaaaagaaatggaagtgtgaaaaatgctcaaagatctat 489
Query: 355 gctgttcagtctgattggaaagcacactccaaaacctgtggtactagagagtataaatgt 414
|||||||| ||||||||||| || || || ||||||||||| ||||||||||||| ||||
Sbjct: 490 gctgttcaatctgattggaaggctcattctaaaacctgtggaactagagagtatagatgt 549
Query: 415 gactgtggaactctttt 431
||||||||||| |||||
Sbjct: 550 gactgtggaaccctttt 566
>29647.m001996 nucleic acid binding protein, putative
Length = 1896
Score = 95.6 bits (48), Expect = 2e-19
Identities = 293/372 (78%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 55 gttatagctttatcaccaaaaactctaatggctacaaacagattcttatgtgaaatatgt 114
||||| |||||||| |||| |||||| ||||| || ||| | || |||||||||||||
Sbjct: 298 gttattgctttatcgccaacaactcttatggcaaccaaccggtttgtatgtgaaatatgc 357
Query: 115 ggaaaagggtttcaaagagatcaaaatctgcagcttcatcgacggggtcataacctgcca 174
|||||||||||||| ||||||||||| || || ||| || | || |||||||| |||
Sbjct: 358 aacaaagggtttcaaagggatcaaaatctacaactgcatagaagaggccataaccttcca 417
Query: 175 tggaagctaaagcaaaggactactaaagaagcaagaaagcgcgtatacgtctgccctgaa 234
|||||||||| |||||| ||||| | |||| || || || || || | |||||||||
Sbjct: 418 tggaagctaaggcaaagaactacaactgaagtaaagaaacgagtctatatatgccctgaa 477
Query: 235 aagtcttgtgtccatcaccatccctctagggctcttggagatttaactggcattaaaaag 294
| ||||| || ||| | || || | || | ||||| |||| ||||||||||||
Sbjct: 478 ccaacatgtgttcaccacaacccggctcgtgcattgggagacctaacaggcattaaaaag 537
Query: 295 cacttttgcagaaagcacggtgagaagaagtggaagtgtgagaagtgttcaaagagatac 354
|| ||| ||||||| || ||||||||||| ||||| ||||| ||||| || |||| |||
Sbjct: 538 cattttagcagaaaacatggtgagaagaaatggaaatgtgataagtgctccaagaaatat 597
Query: 355 gctgttcagtctgattggaaagcacactccaaa-acctgtggtactagagagtataaatg 413
|| ||||| |||||||||||||| || || ||| ||||| ||||| || || || |||||
Sbjct: 598 gcagttcaatctgattggaaagctca-tcaaaagacctgcggtacaagggaatacaaatg 656
Query: 414 tgactgtggaac 425
||| ||||||||
Sbjct: 657 tgattgtggaac 668
>29780.m001362 nucleic acid binding protein, putative
Length = 1770
Score = 83.8 bits (42), Expect = 8e-16
Identities = 138/170 (81%)
Strand = Plus / Plus
Query: 259 tctagggctcttggagatttaactggcattaaaaagcacttttgcagaaagcacggtgag 318
|||||||||||||| ||| | ||||| || || || || | || ||||| || |||||
Sbjct: 376 tctagggctcttggtgatcttactggtatcaagaaacattattctagaaaacatggtgaa 435
Query: 319 aagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgattggaaagca 378
||||| |||||||||||||| || || ||| | || |||||||| ||||||||||||||
Sbjct: 436 aagaaatggaagtgtgagaaatgctctaagcgttatgctgttcaatctgattggaaagct 495
Query: 379 cactccaaaacctgtggtactagagagtataaatgtgactgtggaactct 428
|| || ||||| ||||| ||| |||| || | |||||||||||| |||||
Sbjct: 496 cattctaaaacttgtggcactcgagaatacagatgtgactgtggcactct 545
Score = 61.9 bits (31), Expect = 3e-09
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 79 ctaatggctacaaacagattcttatgtgaaatatgtggaaaagggtttcaaagagatcaa 138
|||||||| |||||||| ||| ||||||| |||| |||||||| ||||| || |||
Sbjct: 196 ctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttccaaagggagcaa 255
Query: 139 aatctgcagcttcatcgacggggtcataacctgccatggaagctaaagcaaaggactact 198
|| || ||||| || || | || ||||||||||| |||||||||||||| | ||||||
Sbjct: 256 aacctacagctccacagaagaggacataacctgccttggaagctaaagcagaagactaca 315
Query: 199 aaagaag 205
|||||||
Sbjct: 316 aaagaag 322
>29646.m001073 nucleic acid binding protein, putative
Length = 1563
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 316 gagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgattggaaa 375
|||||||||||||| ||||| || ||||| |||| ||| |||||||||||||||||||||
Sbjct: 400 gagaagaagtggaaatgtgataaatgttctaagaaatatgctgttcagtctgattggaaa 459
Query: 376 gcacactc 383
|| |||||
Sbjct: 460 gctcactc 467
Score = 63.9 bits (32), Expect = 8e-10
Identities = 128/160 (80%)
Strand = Plus / Plus
Query: 20 gaaatcttccaggaacaccagatcctgaagcagaagttatagctttatcaccaaaaactc 79
|||| ||||| |||| |||||||| || ||||| || || ||| ||||||||||||| |
Sbjct: 104 gaaaccttcccggaatgccagatccagatgcagaggtgattgctctatcaccaaaaaccc 163
Query: 80 taatggctacaaacagattcttatgtgaaatatgtggaaaagggtttcaaagagatcaaa 139
| |||| || |||||||| |||||||||| || || ||||||||||| |||||||
Sbjct: 164 tgttggcaactaacagatttgtatgtgaaatctgcaataaggggtttcaaagggatcaaa 223
Query: 140 atctgcagcttcatcgacggggtcataacctgccatggaa 179
| | ||||||||||| || || ||||| || ||||||||
Sbjct: 224 acttacagcttcatcgccgcggccataatctaccatggaa 263
>30128.m008805 nucleic acid binding protein, putative
Length = 1542
Score = 71.9 bits (36), Expect = 3e-12
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 49 gcagaagttatagctttatcaccaaaaactctaatggctacaaacagattcttatgtgaa 108
||||||||||| ||| |||||||||| || || |||||||||||||||| ||||||||
Sbjct: 244 gcagaagttattgctctatcaccaaatacacttctggctacaaacagatttgtatgtgaa 303
Query: 109 atatgtggaaaagggtttcaaagagatcaaaatctgcagcttcatcgacggggtcataac 168
|| || ||||| || |||||||| || ||||| ||| | ||||| || || || ||
Sbjct: 304 atctgcaacaaaggtttccaaagagaccagaatcttcagttgcatcggcgagggcacaat 363
Query: 169 ctgccatggaagctaaagca 188
|||||||||||||| |||||
Sbjct: 364 ctgccatggaagcttaagca 383
Score = 60.0 bits (30), Expect = 1e-08
Identities = 90/110 (81%)
Strand = Plus / Plus
Query: 313 ggtgagaagaagtggaagtgtgagaagtgttcaaagagatacgctgttcagtctgattgg 372
||||| ||||| ||||| ||||| || || ||||||| ||| || || || |||||||||
Sbjct: 508 ggtgaaaagaaatggaaatgtgataaatgctcaaagaaatatgcagtacaatctgattgg 567
Query: 373 aaagcacactccaaaacctgtggtactagagagtataaatgtgactgtgg 422
||||| ||| | || ||||| || || | ||||||||||||||||||||
Sbjct: 568 aaagctcacgcaaagacctgcggcaccaaggagtataaatgtgactgtgg 617