Jatropha Genome Database
- JcCB0124191.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0124191.10 - phase: 0
(1440 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29851.m002466 pentatricopeptide repeat-containing protein, putative 301 6e-81
>29851.m002466 pentatricopeptide repeat-containing protein, putative
Length = 1461
Score = 301 bits (152), Expect = 6e-81
Identities = 803/1016 (79%), Gaps = 8/1016 (0%)
Strand = Plus / Plus
Query: 428 ttaaattctttgaaatgttactgaaaacttataggcaatgcgattctgctccatttgtgt 487
|||||||||| ||||| || | ||||||||||| | || ||||||||||| ||||| |
Sbjct: 428 ttaaattcttcgaaatattggttaaaacttatagagagtgtgattctgctccttttgttt 487
Query: 488 ttgatttgttgataaaatcttgccttgagttgaaaaagattgatgggtctattgaa-att 546
| |||||| ||||||||||||| ||||| |||||||||||||||| | || || |||
Sbjct: 488 tcgatttgctgataaaatcttgtcttgaattgaaaaagattgatga-tgggttaaagatt 546
Query: 547 gtaaggatgttaaggtctcgtgggattagtccacaaattagaacttgtaatttgttgatt 606
|| || |||||||||||||||||||||| ||| |||||| || |||||||| ||| ||
Sbjct: 547 gtgagattgttaaggtctcgtgggattagcccattaattagtacctgtaattttttggtt 606
Query: 607 tcttgcgttgctaagtgtaaaggttcttgtgctggttatggcatttttagagagattttt 666
||||| ||| | || |||||||| | || ||||||||||||| ||||||||||| | |||
Sbjct: 607 tcttgggtttcgaaatgtaaagggtgttatgctggttatggcgtttttagagaggtcttt 666
Query: 667 ggattga--ga----gacggcgatagtaaagttagattgaggcccgatgtacatagtttt 720
| | ||| || || ||| | || ||| | | || || |||| |||| ||||
Sbjct: 667 gaagtgaatgataatgagggcaaaagggtcattaaagttagacctaatgtgcatactttt 726
Query: 721 aatgatttgatgatggggttttatagagatggtgaaatggagatgatagaggaagtatgg 780
||||| |||||||||| |||||| ||||||||||| |||||||| ||||||| || |||
Sbjct: 727 aatgagctgatgatgggtttttatcgagatggtgaattggagatggtagaggaggtttgg 786
Query: 781 aatgaaatggagagatttggatgtgttccaaatctgtatagttataacattttgatggct 840
| ||| ||||||||||||| |||||||||||| | |||||||| | |||||| ||
Sbjct: 787 agtgagatggagagatttgagtgtgttccaaatggatttagttatagtgtgttgatgact 846
Query: 841 ttgttttgtggtgaagggaagatgagagaagcagagaagttatgggaagaaatgagagtg 900
| ||| || || |||| || || |||| ||||||||||||||| ||||||||||
Sbjct: 847 gtctttcttgatgtggggaggacgaaagaaatagagaagttatgggaggaaatgagagca 906
Query: 901 aagggactgaggctcgatgttacggcttataatactataattggtggattttataagagc 960
|||||| | | | |||||| ||||||||||||| | ||||||||||||| |||||
Sbjct: 907 aagggaataaagggtgatgttgtggcttataatactgtgattggtggattttgtaagatt 966
Query: 961 gggcagattgaaaaagctgaggaattttttaaagaaatggagttgggtggagtagaaagt 1020
||| |||||||||| ||||||||| | | | ||||||||| ||| ||| || ||| |
Sbjct: 967 ggggagattgaaaaggctgaggaactctcgagagaaatggaattgaatggtgttgaagct 1026
Query: 1021 aatagtgttacctttgagcacctaattaatggctattgtaaagttggggatgttgattca 1080
||| ||||||| |||||||| || || ||||| ||||||| ||||| |||||||||||
Sbjct: 1027 aattgtgttacttttgagcatctcatcaatgggtattgtagtgttggagatgttgattcc 1086
Query: 1081 gctattcttgtatataaagatatgcttcagaaagatttcaggcctgaagcttcaacaata 1140
|| |||||||| | |||| ||||| || ||||| || ||| |||||| ||| |||
Sbjct: 1087 gcaattcttgtgtttaaacatatggttaggaaaggatttagggctgaaggttcggtaatg 1146
Query: 1141 ggcatgctgattgaaggactttgtgagaagaagagagtttctgaagctttggagattatt 1200
| | | | |||| ||| |||||||| |||| || |||||||||||||| ||||||||
Sbjct: 1147 gacgtattaattggagggctttgtgaaaagagaagggtttctgaagctttagagattatg 1206
Query: 1201 aggaatgcaatgagagatgttagtttttgtccaagtaggaagagttatgaattgttgatt 1260
|||| |||||||||| ||| ||||| ||| || | |||||||||||||||||||||
Sbjct: 1207 aggattgcaatgagaaatgacggttttcgtcttagcggaaagagttatgaattgttgatt 1266
Query: 1261 aagcggttgtgcgaggatggccagatggaagaagcattaaagcttcaagccaagatggca 1320
||| |||| || ||||||| ||||||| |||||||| |||||||| || | |||| |
Sbjct: 1267 aaggggttatgtaaggatggtaagatggatgaagcattgaagcttcaggctgaaatggta 1326
Query: 1321 ggcaaagggtttgaaccagatttaaagatttatgatgcttttattgaagggtataagaag 1380
|| ||| ||||| ||| |||| ||||||||| |||||||||||| ||||||| ||||
Sbjct: 1327 gggggaggatttgagccaaattttgagatttatggtgcttttattgatgggtatatgaag 1386
Query: 1381 ttaggaaatgatcaaatggcagcaacattgataatggaaatgtctagaactcaaaa 1436
||||||||||| |||||||||| | |||| | |||||||||| ||| ||||||
Sbjct: 1387 ttaggaaatgaggaaatggcagctatgttgaggaaggaaatgtctggaattcaaaa 1442
Score = 67.9 bits (34), Expect = 2e-10
Identities = 129/160 (80%), Gaps = 3/160 (1%)
Strand = Plus / Plus
Query: 123 ttcactgcttatccaccaccgttccaaatcccgatggaccaatctccgctc---cttact 179
|||||| || ||||||||||| |||||||| |||||||| |||||||||| | | ||
Sbjct: 117 ttcactcctaatccaccaccgctccaaatcaagatggacccatctccgctcactcattct 176
Query: 180 ttactccaccaaaactctaacccctatccacttttcccagattgccctccaattgaaatc 239
||| | |||||| |||||||| | |||||||||||| ||| ||| | || |||||
Sbjct: 177 cacctcgaacaaaaccctaaccccaacccacttttcccaaattatccttctcttaaaatc 236
Query: 240 aaacccccatcttgcccttcgcttcttcttcttcactcta 279
||| |||| ||||||||| ||||||||| ||||||||||
Sbjct: 237 aaatccccgtcttgccctccgcttcttccacttcactcta 276