Jatropha Genome Database
- JcCB0124021.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0124021.20 - phase: 0 /partial
(1650 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29682.m000601 F-box/leucine rich repeat protein, putative 511 e-144
29451.m000049 ubiquitin-protein ligase, putative 56 7e-07
>29682.m000601 F-box/leucine rich repeat protein, putative
Length = 2088
Score = 511 bits (258), Expect = e-144
Identities = 486/562 (86%)
Strand = Plus / Plus
Query: 1034 atggattttggtgcaagtcctgggataaactcaggtatctctctctttggattggtgttg 1093
||||| ||||| |||| ||||||||||| || | | |||||||| |||||||||||||
Sbjct: 1469 atggagtttggagcaattcctgggataacctaaaatgcctctctctctggattggtgttg 1528
Query: 1094 gtgagcttctaaatccattgccaatggctggtctcgaagattgtcctagtttggaggaga 1153
|||||||||||| ||||||||| ||||||||||| || ||||| |||||| |||||||||
Sbjct: 1529 gtgagcttctaactccattgcccatggctggtcttgaggattgccctagtctggaggaga 1588
Query: 1154 tacggatacgggttgaaggggattgcagaggcaggcataagccattacagcatgcatttg 1213
| | ||| |||||||||||||||||||| ||| |||| || | || ||| | ||||||||
Sbjct: 1589 ttcagatccgggttgaaggggattgcaggggccggcacaaactatcacaacgtgcatttg 1648
Query: 1214 gattgagctgccttgcacaatatcatcggttgtcaaagatgcagctggattgtagtgaca 1273
|||||||||||||||| || |||| |||| | ||||| |||||| ||||||| |||||||
Sbjct: 1649 gattgagctgccttgctcattatcctcggctatcaaaaatgcagttggattgcagtgaca 1708
Query: 1274 caataggtttcgcgttgactgccccatctgggcaaatggatttaagcctgtgggagaggt 1333
|||||||||| || || ||||||||||| || ||||||||||| ||| | ||||||||||
Sbjct: 1709 caataggttttgccttaactgccccatcaggacaaatggatttgagcttatgggagaggt 1768
Query: 1334 ttttcttaaatggcattggtaatttgagtctcaacgagcttgattactggccaccacaag 1393
| ||||| ||||| ||||| | |||||||||| ||||||||||| |||||||||||||
Sbjct: 1769 tcttcttgaatgggattggaagcttgagtctcattgagcttgattattggccaccacaag 1828
Query: 1394 acagagatgttaaccaaaggagtctgtcgcttccaggagctgggttgctggcagaatgtc 1453
|||| || ||||||||||||||||| || |||||||||||||||||||| ||| | ||||
Sbjct: 1829 acagggacgttaaccaaaggagtctatcacttccaggagctgggttgcttgcacagtgtc 1888
Query: 1454 ttacactgaggaagctctttatacatggtacagcccatgagcatttcatgatgttccttc 1513
|| | || |||||||||||||| ||||| || || |||||||||||||||||||||||||
Sbjct: 1889 ttgcgctaaggaagctctttatccatggaactgcgcatgagcatttcatgatgttccttc 1948
Query: 1514 tcagaattccaaacctgagggatgtacaacttagggaagactactatccagcaccagaaa 1573
|| |||| ||||||||||||||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 1949 tccgaatcccaaacctgagggatgtgcagcttagggaagactactatccagccccagaga 2008
Query: 1574 acgacatgagtacagaaatgag 1595
| || ||||| ||||| |||||
Sbjct: 2009 atgatatgagcacagagatgag 2030
Score = 353 bits (178), Expect = 2e-96
Identities = 577/710 (81%)
Strand = Plus / Plus
Query: 154 ttagatctgcttacagtttcattaactgacgggtttaaggcacatgaaattcgagtaatc 213
|||||||||||||| ||||| |||||||| || || ||| | |||| ||| ||| ||
Sbjct: 580 ttagatctgcttactgtttccttaactgatggtttcaagtctgatgagattaaagttatt 639
Query: 214 actgctgcttgtacaaatctcacaaaattccttgtagtttgtatgttcgatccaagttac 273
|||||||||||||| ||||| ||||| || ||||| | ||||||||| |||||||||||
Sbjct: 640 actgctgcttgtactaatcttacaaagtttcttgttgcttgtatgtttgatccaagttat 699
Query: 274 cttggattcattggagacgagacgctgcttgctattgctgctaattgtcccaaattatcg 333
|| || || | |||||| ||||| |||||||| ||||||| ||||| || |||||||||
Sbjct: 700 ctagggtttactggagatgagactttgcttgctgttgctgccaattgccctaaattatcg 759
Query: 334 gttcttcatcttgtcgatacgtcatccttggggaacacaaggcatgatcccgaggacgaa 393
|| |||||| | || |||||||| ||||| ||||| | ||| |||||| ||||| |||
Sbjct: 760 gtgcttcatttggttgatacgtcgtccttagggaatattaggagtgatcctgaggatgaa 819
Query: 394 gggtatacaggggaggatgctcggatcagtgttgtagggttggttgattttttctctgga 453
||||| | ||||| |||||| || | |||||| |||||||||||||||||| |||
Sbjct: 820 gggtacagtggggatgatgctagggttagtgttaatgggttggttgattttttcagtggg 879
Query: 454 cttccattgcttgaagagttggttctttgcgtttgcaagaatgttagagatagtgctgtg 513
|||||||||||||||||||| |||||| | ||||| |||||||||||||||||| ||||
Sbjct: 880 cttccattgcttgaagagttagttcttcgtgtttgtaagaatgttagagatagttttgtg 939
Query: 514 gctttcgaagcacttaattcccggtgtcccaagttgaaagttctcaatctagagcaattc 573
||| | ||||| |||||||| | ||||| ||||||||||| | | ||| ||| ||
Sbjct: 940 gctctggaagcgcttaattcgagatgtccgaagttgaaagtgttggagttagtgcagttt 999
Query: 574 catggtatttgcatggctgtggagtcccagcttgacggaattgcattgtgttcagggctg 633
|||||| |||| ||||| || || || ||||| || || ||||||||||||| || ||
Sbjct: 1000 catggtgtttgtatggcagttgaatcgcagctcgatggggttgcattgtgttctggattg 1059
Query: 634 gagtcgttgtctataaagaaggcagcagatttgacagacatgggtttgatagagattgca 693
| || ||||| || |||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 1060 aaatcattgtcgattaagaagtgtgcagatttgactgatatgggtttgatagagattgcg 1119
Query: 694 agaggatgtcataaactggcaaaatttgaagttgagggatgcaagaagattacaatgaag 753
||||||||| || | |||| || ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1120 agaggatgttgtagattggccaagtttgaggttgagggatgtaagaagattactatgaag 1179
Query: 754 ggcataaggacaatggcttctttgcttcacaagactctgattgaggtcaagatctctgct 813
|| | ||||| ||||| ||||||||| |||||||| |||||||||| |||||||||
Sbjct: 1180 ggattgaggacgatggcaagtttgcttcataagactctagttgaggtcaaaatctctgct 1239
Query: 814 tgtaagaatctggatactgcagcaattttgagagctttagagcctattcg 863
||||||||||| ||| ||| || |||| ||||||| |||||||||||
Sbjct: 1240 tgtaagaatcttgatgctgttgcctctttgcgagctttggagcctattcg 1289
>29451.m000049 ubiquitin-protein ligase, putative
Length = 1164
Score = 56.0 bits (28), Expect = 7e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 1462 aggaagctctttatacatggtacagcccatgagcatttcatgatgttccttctcagaatt 1521
|||||||| ||||| ||||| |||||| |||| |||||||||||||| || || | | ||
Sbjct: 1060 aggaagctgtttattcatggcacagccaatgaacatttcatgatgtttctgctaaaagtt 1119
Query: 1522 ccaaacctgagggatgtaca 1541
|||| || |||||||||||
Sbjct: 1120 ccaactcttagggatgtaca 1139