Jatropha Genome Database

JcCB0124021.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0124021.10 + phase: 0 /pseudo/partial
         (366 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29682.m000600 protein kinase, putative                                200   4e-51

>29682.m000600 protein kinase, putative
          Length = 2433

 Score =  200 bits (101), Expect = 4e-51
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                        
Query: 172  tgcacactaaatagaccatgggaaggagtgccgccggaaagggtagtttatgccgttgct 231
            ||||||||||| |||||||||||||||||||| || |||||||| || ||||| ||||||
Sbjct: 2236 tgcacactaaacagaccatgggaaggagtgccaccagaaagggttgtatatgctgttgct 2295

                                                                        
Query: 232  aatgagggatcacgattggagattcctgaaggtccactgggcaggttaatttcagattgt 291
            |||||| |||| || ||||| ||||| ||||||||||| |||||||||||||||||||| 
Sbjct: 2296 aatgagcgatcccgtttggatattccggaaggtccacttggcaggttaatttcagattgc 2355

                                                                        
Query: 292  tgggcagaaccccatgaacgaccaagctgcgaagagatactctcccggttgctggattgc 351
            |||| |||||| |||||||| |||||||| |||||||||||| |||| ||||| || |||
Sbjct: 2356 tggggagaaccacatgaacggccaagctgtgaagagatactcgcccgtttgctcgactgc 2415

                 
Query: 352  gagta 356
            |||||
Sbjct: 2416 gagta 2420



 Score =  133 bits (67), Expect = 8e-31
 Identities = 130/143 (90%), Gaps = 6/143 (4%)
 Strand = Plus / Plus

                                                                        
Query: 27   tgcatgaagccgtcctcacttgtctaatggttacttgaatatatggaggatggggtccgt 86
            ||||||||||| ||||||||| || |||||||||  |||||||||||| ||||| ||  |
Sbjct: 1852 tgcatgaagcc-tcctcacttatc-aatggttacg-gaatatatggag-atgggttca-t 1906

                                                                        
Query: 87   tgtattatttgatccatttgagtggtcagaagaagaggcttagttggagaaggaagctaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1907 tgtattatttgatccatttgagtggtcagaagaagaggcttagttggaggaggaaactaa 1966

                                   
Query: 147  aaatgttgcgagattatatgcag 169
            |||||||||| || |||||||||
Sbjct: 1967 aaatgttgcgtga-tatatgcag 1988