Jatropha Genome Database

JcCB0123971.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0123971.10 + phase: 0 /pseudo/partial
         (659 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001229 3-hydroxybutyryl-CoA dehydratase, putative              480   e-135

>29709.m001229 3-hydroxybutyryl-CoA dehydratase, putative
          Length = 1155

 Score =  480 bits (242), Expect = e-135
 Identities = 422/482 (87%)
 Strand = Plus / Plus

                                                                       
Query: 166 ggtgatgtttctgctgtggttcgtgatatccgtgaaggcaattggagattaggtgccaac 225
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| 
Sbjct: 217 ggtgatgtttctgctgtggttcgtgatatacgtgaaggtaattggagattaggtgccaag 276

                                                                       
Query: 226 ttctttgagaaagaatacatgttaaactatgttatggcaacatacactaaacctcaggtt 285
           |||||||| || |||| ||| || |||||||| ||||| || ||||||||||| ||||| 
Sbjct: 277 ttctttgaaaaggaattcattttgaactatgtgatggcgacttacactaaaccccaggtc 336

                                                                       
Query: 286 tcaattcttaatggaattgtcatgggaggtggtgctggtgcttcaatgcatggtagattc 345
           ||||| ||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 337 tcaatccttaacggaattgtcatgggaggcggtgctggagcttcaatgcatggaagattc 396

                                                                       
Query: 346 cgtgttgcaactgagaattcgatctttgcgatgcctgaaaccgctcttggactctttcct 405
           || |||||||||||||||||| ||||||| ||||||||||| ||||| || || ||||||
Sbjct: 397 cgcgttgcaactgagaattcggtctttgcaatgcctgaaacagctctagggctttttcct 456

                                                                       
Query: 406 gatgttggtgccacttatttcttgtcaaggcttcctggattctttggggaatatgttgga 465
           ||||| |||||| ||||||| |||||||| ||||||||||||||||| |||||| |||||
Sbjct: 457 gatgtaggtgcctcttattttttgtcaagacttcctggattctttggagaatatcttgga 516

                                                                       
Query: 466 cttaccggtgcaaggttggatggtgctgaaatgcttgcatgtggccttgcaacccacttt 525
           ||||| ||||| || ||||||||||||||||||||  ||||||| |||||||| ||||||
Sbjct: 517 cttacaggtgctagattggatggtgctgaaatgctcacatgtggacttgcaactcacttt 576

                                                                       
Query: 526 gtcccatctgagaacttgtctttgttagaagaagcattgtacaaagcagatacaagcgat 585
           ||||||||    || |||| ||||||||||||||||||| | |||  |||| |||| |||
Sbjct: 577 gtcccatcaacaaagttgtatttgttagaagaagcattgcataaaatagattcaagtgat 636

                                                                       
Query: 586 cctgccatcatttcacttatcattgatgaatactctcaacaaccatatttaaaagagcaa 645
           || | ||||||||||   || ||||||| ||||| ||| ||||||||||| |||||||||
Sbjct: 637 ccagacatcatttcatccattattgatggatactgtcagcaaccatatttgaaagagcaa 696

             
Query: 646 ag 647
           ||
Sbjct: 697 ag 698



 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                         
Query: 119 cttgcttatgaggaggatcctaatgtcaaattcattgttctcaagg 164
           |||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 145 cttgcttacgaggaggatcctaatgtcaaattccttgttctcaagg 190