Jatropha Genome Database
- JcCB0123131.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0123131.10 + phase: 0 /partial
(591 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29830.m001447 heterogeneous nuclear ribonucleoprotein, putative 712 0.0
>29830.m001447 heterogeneous nuclear ribonucleoprotein, putative
Length = 795
Score = 712 bits (359), Expect = 0.0
Identities = 531/587 (90%), Gaps = 1/587 (0%)
Strand = Plus / Plus
Query: 4 gcactgacattgactatcttcaaattctttgctggactggatattgttgatgtgctgctg 63
|||||||||| ||| |||||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 206 gcactgacatcgac-atcttcaagttctttgctggacttgacattgtggatgtgctgctg 264
Query: 64 gtcaataagaatggacgtttcacaggagaggctttcgtcgtctttgcagggtctatgcag 123
||||||||||||||||| || |||||||||||||| || ||||||||||| | ||||||
Sbjct: 265 gtcaataagaatggacggtttacaggagaggcttttgtggtctttgcaggagccatgcag 324
Query: 124 gttgagtttgctttacagagagatcgacagaacatgggccgtagatatgtggaagttttt 183
||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||
Sbjct: 325 gttgagtttgctttacagagagaccgacagaacatgggacgcagatatgtggaagtcttt 384
Query: 184 aggtgcaagaggcaggattattacaatgctgttgcagcagaggtgaattatgaaggaatc 243
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 385 aggtgcaagaggcaggattattataatgctgttgctgcagaggtgaattatgaaggaatt 444
Query: 244 tatgacactgattatcatggaagtccaccaccatctaaagcaaagaggttcagtgataag 303
||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 445 tatgacactgactaccatggaagccctccaccatctaaagcaaagaggttcagtgataag 504
Query: 304 gagcaattggaatatactgagattttgaagatgcgaggactacccttctctgtgaaaaaa 363
|| ||||| ||||| ||||||||||||||||||||||| || |||||||||| |||||||
Sbjct: 505 gatcaattagaatacactgagattttgaagatgcgaggtctccccttctctgcgaaaaaa 564
Query: 364 cccgaaataatagatttctttaaagaattcaagctggttgaagaaaggatacacattgcg 423
|| |||||||| || || |||||||||||| ||||||||||||| || |||||||||||
Sbjct: 565 cctgaaataattgaattttttaaagaattcgagctggttgaagatagaatacacattgca 624
Query: 424 tgtcgcccagatgggaaagctactggtgaggcatacgtagagtttgtttctgctgaggaa 483
|| || |||||||||||||||||||| ||||| || |||||||||| ||||||||| |||
Sbjct: 625 tgccggccagatgggaaagctactggagaggcctatgtagagtttgcttctgctgatgaa 684
Query: 484 gcaaaaagagccatgagcaaggataagatgaccataggatcaaggtatgtggagttgttt 543
|| |||||||| |||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct: 685 gctaaaagagctatgagcaaggataagatgacaattgggtcaaggtacgtggagttgttt 744
Query: 544 ccttcaacaccagatgaagccagaagagccgagtcaagatcaaggca 590
|| |||||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 745 ccatcaacacccgacgaagctagaagagctgagtcaagatcaaggca 791