Jatropha Genome Database
- JcCB0122521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0122521.10 - phase: 0
(1560 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29813.m001476 conserved hypothetical protein 176 3e-43
>29813.m001476 conserved hypothetical protein
Length = 1530
Score = 176 bits (89), Expect = 3e-43
Identities = 306/378 (80%), Gaps = 9/378 (2%)
Strand = Plus / Plus
Query: 828 actaaaaccgcgaaaatcactagaagtctttggatctccagtaaatgacgacaagcgaag 887
|||||| |||||||||||||| || || ||||| || |||||| ||||| | || |||
Sbjct: 801 actaaatccgcgaaaatcactggaggtgtttggctccccagtacatgacaagaa---aag 857
Query: 888 caaatctttcagaattgaaagaagattatcaatgttatcgtgggatacaacaaagaatcc 947
||| ||||| |||||||| || || | |||||||| || ||||||||||| |||
Sbjct: 858 caagtcttttagaattgagaggaggctgtcaatgttgtcctgggatacaac------tcc 911
Query: 948 aaaaatggaagaaatagactattctgctacttcaggcggtggaatttacaatgacaatga 1007
|||||||||||| || | ||| || ||||| ||| |||| | ||||||| || |||||
Sbjct: 912 aaaaatggaagagattgcctactccgctacatcatcaggtgtagtttacaacgataatga 971
Query: 1008 aagcgatgcaagttcagacttgtttgaaatcgaaagtctctccggaaaagtcacaccata 1067
|||||||||||||| ||||| ||||| || || || || | |||||||| || ||||
Sbjct: 972 gagcgatgcaagttcggacttatttgagattgagagcctgacaggaaaagttactccatt 1031
Query: 1068 tcttgcaagacaaaaatcagatgtcacttctggttgtgttacccctacaacttgctatgc 1127
||| ||||| ||| |||||||| |||||||| ||| | ||||| ||||||||||||||
Sbjct: 1032 tctggcaaggcaaggatcagatgaaacttctggctgtatcaccccaacaacttgctatgc 1091
Query: 1128 accaagtgaggctagcattgaatggagtgttgtcactgcaagtgctgcagatttttctgc 1187
|||||| ||||||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct: 1092 accaagcgaggctagcatagagtggagtgtagtcactgctagtgctgcagatttctctgt 1151
Query: 1188 tatgtcagattatgaaga 1205
||||| |||||||||||
Sbjct: 1152 aatgtctgattatgaaga 1169
Score = 131 bits (66), Expect = 1e-29
Identities = 96/106 (90%)
Strand = Plus / Plus
Query: 519 gaattttcttgctggtcttggctgcaaatgttattgttccgataaagattctattgatgt 578
||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||
Sbjct: 474 gaattttctcgctggtcttggttgcaaatgtgcttgttctgataaagattctattgatgt 533
Query: 579 tgatgatgaacatgttggcgaaatcagtttcaagaaaagtcctaat 624
|||||||| ||||| ||||||||||||||||| | ||||||||||
Sbjct: 534 tgatgatgcccatgtcggcgaaatcagtttcaaaagaagtcctaat 579
Score = 69.9 bits (35), Expect = 4e-11
Identities = 99/119 (83%), Gaps = 6/119 (5%)
Strand = Plus / Plus
Query: 196 ggaagaaagaaagtagctgaagatggagaaattggagtatttagtgcagagaaatacttc 255
|||||||||||||||| |||||||||||||||||||||||||||| || || || |||
Sbjct: 166 ggaagaaagaaagtag---aagatggagaaattggagtatttagtgctgaaaagtatttc 222
Query: 256 aatggagtaatagatgaggatag---tccaagaattacaaaaataattccaagaaagta 311
|| |||| ||| || || ||||| ||||||| |||| || || |||||||| |||||
Sbjct: 223 aacggaggaattgaagaagatagtactccaagacttaccaatattattccaaggaagta 281
Score = 61.9 bits (31), Expect = 1e-08
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 1506 ttcactccctcgctcacacccatcgcaaagttcgcatcttttgtacattcaataa 1560
|||||||||||| | |||||| | |||||||| |||||||||||||||||||||
Sbjct: 1476 ttcactccctcggttgcacccacctcaaagttctcatcttttgtacattcaataa 1530