Jatropha Genome Database

JcCB0121711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0121711.10 + phase: 0 /partial
         (459 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29989.m000424 ATP binding protein, putative                           172   1e-42
29908.m006084 kinase, putative                                         58   5e-08

>29989.m000424 ATP binding protein, putative
          Length = 939

 Score =  172 bits (87), Expect = 1e-42
 Identities = 237/287 (82%)
 Strand = Plus / Plus

                                                                       
Query: 157 aaaggggatgtttacagctttggagttgttctgctagagcttttgactggaaagaaaccc 216
           |||||||||||||| || |||||||||||||| || || ||||| |||||||||||||| 
Sbjct: 634 aaaggggatgtttatagttttggagttgttctactggaacttttaactggaaagaaacca 693

                                                                       
Query: 217 acagatgaagcattctttgaggaaggaaccaagcttgtgacctgggtaaaggaagttgtt 276
           |||||||| |||||||||||||||||||| ||||||||||| ||||| || | |||||||
Sbjct: 694 acagatgatgcattctttgaggaaggaactaagcttgtgacatgggtgaaagcagttgtt 753

                                                                       
Query: 277 gaagataatagagaagagtatgtacttgacagtagcctaaagtgctgcccaagcgatgag 336
           | |||| | || |||| ||||| ||||||||  || || ||||   | |||| | | |||
Sbjct: 754 ggagatgagagggaagcgtatgcacttgacaagagactgaagtatggtccaatcaaagag 813

                                                                       
Query: 337 attaacaatgccttcagaattgcatacttgtgccttgaaccagagccctctgtaagacct 396
           ||||||||    ||||||||||||    |||||||||||||||||||  ||   ||||||
Sbjct: 814 attaacaacatgttcagaattgcaatgatgtgccttgaaccagagcctactaagagacct 873

                                                          
Query: 397 actatggctgagattgtcaagatgcttgagcgagttaaatcagagaa 443
           || |||  |||||||||  |||||||||||||||  |||||||||||
Sbjct: 874 accatgattgagattgtgcagatgcttgagcgagcaaaatcagagaa 920


>29908.m006084 kinase, putative
          Length = 2184

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                             
Query: 103  ggaactttcggatacttggctcctgagtacttt 135
            ||||||||||||||||||| |||||||||||||
Sbjct: 1672 ggaactttcggatacttggatcctgagtacttt 1704