Jatropha Genome Database

JcCB0120781.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0120781.10 + phase: 0 
         (393 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29799.m000633 superoxide dismutase [fe], putative                     371   e-102

>29799.m000633 superoxide dismutase [fe], putative
          Length = 798

 Score =  371 bits (187), Expect = e-102
 Identities = 340/391 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaaccaggaggaggggagatgcctgaacttggggtacttcagcaaattgaaaaagac 60
           |||||||||| ||||||||||||||| ||||||||||| || ||||| ||||| || || 
Sbjct: 406 atgcaaccagcaggaggggagatgcccgaacttggggtgctccagcagattgagaaggat 465

                                                                       
Query: 61  ttcggttccttcacaaatttcaaggagaagtttgtggaagccgctcttacactatttgga 120
           || |||||||||||||||||||| ||||||||| | ||||  ||||||||||||||||| 
Sbjct: 466 tttggttccttcacaaatttcaaagagaagtttatagaagaagctcttacactatttggc 525

                                                                       
Query: 121 tccggttggatttggcttgttctgaaaagagaagaaagacaacttgctattacgaaaaca 180
           || |||||||||||||||||  |||| |||||||| |||||||||||||| |  ||||||
Sbjct: 526 tctggttggatttggcttgtcttgaagagagaagagagacaacttgctataattaaaaca 585

                                                                       
Query: 181 tcaaatgccatcactccgcttgtatgggacaatattcccatcatctgtttagatatgtgg 240
           |||||||||| || |||||||||||||||  ||||||| |||||||||||||||||||||
Sbjct: 586 tcaaatgccaacaatccgcttgtatgggatgatattccaatcatctgtttagatatgtgg 645

                                                                       
Query: 241 gagcatgcttattatctggattacaagaatgacaaaggaagctatgtgaatgcttttatg 300
           ||||||||||||||||||||||| ||||||||||  || |  ||||||||||| || |||
Sbjct: 646 gagcatgcttattatctggattataagaatgacagggggaagtatgtgaatgcattcatg 705

                                                                       
Query: 301 aatcaccttttatcttggaatgtggcaatggcacgcatggcacgtgcagaggcctttgtt 360
           ||||||||  | |||||||| |  |  |||||||||||||| ||||||||||| ||||||
Sbjct: 706 aatcacctgatctcttggaacgcagtgatggcacgcatggctcgtgcagaggcttttgtt 765

                                          
Query: 361 aacttgggagatccaaaaattcctgttgctt 391
           || || || || ||||||||||| |||||||
Sbjct: 766 aatttaggtgagccaaaaattccggttgctt 796