Jatropha Genome Database

JcCB0119431.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0119431.20 + phase: 2 /pseudo/partial
         (605 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001195 short chain alcohol dehydrogenase, putative              86   3e-16

>30075.m001195 short chain alcohol dehydrogenase, putative
          Length = 813

 Score = 85.7 bits (43), Expect = 3e-16
 Identities = 124/151 (82%)
 Strand = Plus / Plus

                                                                       
Query: 351 taggaaccaaacatgcagctcgagtgatgattcctgctctacaagggagtataattacac 410
           |||| |||||||| || ||||| |||||||||||||||| |||||| || ||||| || |
Sbjct: 389 taggcaccaaacacgctgctcgggtgatgattcctgctcgacaaggtagcataatcactc 448

                                                                       
Query: 411 taggcagcgtttgctcaagtgtaggtggtgtggcatctcatgcatacactagtacaaagc 470
           | ||||| ||||| || || ||||||||||| || |||||| ||||||| | | | || |
Sbjct: 449 ttggcagtgtttgttccagcgtaggtggtgttgcttctcattcatacaccattgcgaaac 508

                                          
Query: 471 atggagtcataggtctagcaaaaaatgcagc 501
           ||||| |  ||||||||||||  ||||||||
Sbjct: 509 atggaatagtaggtctagcaaggaatgcagc 539