Jatropha Genome Database
- JcCB0116941.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0116941.10 + phase: 0
(447 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29915.m000490 ubiquitin-conjugating enzyme E2, putative 184 3e-46
28128.m000154 ubiquitin-conjugating enzyme E2, putative 168 2e-41
28049.m000299 ubiquitin-conjugating enzyme E2, putative 139 2e-32
29728.m000818 ubiquitin-conjugating enzyme E2, putative 117 6e-26
30169.m006544 ubiquitin-conjugating enzyme E2, putative 58 5e-08
>29915.m000490 ubiquitin-conjugating enzyme E2, putative
Length = 393
Score = 184 bits (93), Expect = 3e-46
Identities = 225/269 (83%)
Strand = Plus / Plus
Query: 28 ctgaaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggat 87
|||||||| ||||||| |||||| || ||||| |||||||||||||||||||| || ||
Sbjct: 28 ctgaaggatttgcagaaagatccgcctacttcttgcagtgcaggtcctgtagcggaagac 87
Query: 88 atgttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgtt 147
||||||||||||||||| || ||||| || ||| || || |||||||| || ||||||
Sbjct: 88 atgttccactggcaagcaacgatcatgggaccgtccgatagcccatatgcaggaggtgtt 147
Query: 148 ttccttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttc 207
|| || || ||||| |||||||||||||| ||||||||||||||||| ||||| || ||
Sbjct: 148 tttctagtgactatccatttcccacctgattatcctttcaagcctccaaaggttgcattt 207
Query: 208 aggactaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactc 267
||||||||||| || || || ||||| || |||||||||| || ||| | || || |||
Sbjct: 208 aggactaaggtctttcacccgaacataaacagcaatggaagcatttgtcttgatatcctc 267
Query: 268 aaagaacaatggagtcctgcactcaccat 296
|||||||||||||| ||||| || |||||
Sbjct: 268 aaagaacaatggagccctgctcttaccat 296
>28128.m000154 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 168 bits (85), Expect = 2e-41
Identities = 289/357 (80%)
Strand = Plus / Plus
Query: 29 tgaaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggata 88
|||||||||||||| | || |||||| | ||||||||||| ||||| || ||||| || |
Sbjct: 29 tgaaggacttgcagcgtgaccctccagcatcatgcagtgctggtccagttgctgatgaca 88
Query: 89 tgttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgttt 148
||||||| |||||||| || ||||| || ||| ||| || |||| | |||||||||| |
Sbjct: 89 tgttccattggcaagcaacaatcatgggcccggctgatagcccatttactggtggtgtgt 148
Query: 149 tccttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttca 208
| ||||| | ||||| || ||||| |||||||| |||||||| |||||||| |||||
Sbjct: 149 ttcttgtatcaattcactttccaccagactatccattcaagccacccaaggtttccttcc 208
Query: 209 ggactaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactca 268
| || |||||||||||||| |||||||| ||||| |||| || || | ||||| ||||
Sbjct: 209 gtacaaaggttttccatcccaacatcaacagcaacggaagcatttgccttgacattctca 268
Query: 269 aagaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgc 328
|||| || ||||||||||| || |||||||| |||||| | ||||| || ||||| | |
Sbjct: 269 aagagcagtggagtcctgcccttaccatatctaaggttcttctgtcaatctgctcactcc 328
Query: 329 ttacagacccaaatcctgatgatccactggttcctgaaattgctcatatgtgcaaga 385
| || || ||||| || |||||||| ||||| ||||| |||||||| |||| |||||
Sbjct: 329 tgactgatccaaacccagatgatccgctggtgcctgagattgctcacatgtacaaga 385
>28049.m000299 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 139 bits (70), Expect = 2e-32
Identities = 316/398 (79%)
Strand = Plus / Plus
Query: 46 gatcctccaacttcatgcagtgcaggtcctgtagctgaggatatgttccactggcaagct 105
|||||||| || || |||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 46 gatcctcctacctcttgcagtgctggacctgtagctgaggacatgtttcactggcaagcc 105
Query: 106 accatcatcggtccgaatgacagtccatatgctggtggtgttttccttgtcactattcat 165
|| || || ||||| ||||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 106 acaataatgggtccccctgacagtccttatgctgggggtgtgttccttgttactattcat 165
Query: 166 ttcccacctgactatcctttcaagcctcccaaggtcgccttcaggactaaggttttccat 225
|| || || || ||||| || ||||| || ||||| || |||||||| |||||||| ||
Sbjct: 166 tttcctccagattatccatttaagccaccaaaggttgcattcaggacaaaggtttttcac 225
Query: 226 ccaaacatcaatagcaatggaaatatatgtttggacatactcaaagaacaatggagtcct 285
|| || ||||| || ||||| | || || | ||||| || || || || ||||| |||
Sbjct: 226 cctaatatcaacagtaatggcagcatttgccttgacattctaaaggagcagtggagccct 285
Query: 286 gcactcaccatatccaaggttttgctgtccatatgctctttgcttacagacccaaatcct 345
|| || || ||||| ||||| || || |||||||| || | | || ||||| || ||
Sbjct: 286 gccctgacaatatctaaggtgttactctccatatgttccctcttgacggacccgaaccca 345
Query: 346 gatgatccactggttcctgaaattgctcatatgtgcaagactgacaaagtcaagtacgat 405
||||| || || || || |||||||||||||||| |||||| |||| | |||||||||
Sbjct: 346 gatgaccccctcgtgccagaaattgctcatatgtacaagacagacagggccaagtacgag 405
Query: 406 tctactgctaggagctggacccaaaagtatgctatggg 443
| || ||| ||||||||||||| |||||||| |||||
Sbjct: 406 gcaacagctcggagctggacccagaagtatgccatggg 443
>29728.m000818 ubiquitin-conjugating enzyme E2, putative
Length = 447
Score = 117 bits (59), Expect = 6e-26
Identities = 275/347 (79%)
Strand = Plus / Plus
Query: 29 tgaaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtagctgaggata 88
||||||||||||||| || ||||| ||||| ||||||||||||| | ||| || |
Sbjct: 29 tgaaggacttgcagaaggaccctcctgtctcatgtagtgcaggtcctgctggtgatgaca 88
Query: 89 tgttccactggcaagctaccatcatcggtccgaatgacagtccatatgctggtggtgttt 148
||||||| |||||||| || || || ||||| ||||| ||||||||||||||||| |
Sbjct: 89 tgttccattggcaagcaactattatgggtccagcagacagcccatatgctggtggtgtct 148
Query: 149 tccttgtcactattcatttcccacctgactatcctttcaagcctcccaaggtcgccttca 208
|| | | | || |||||||| ||||| || || |||||||| ||||||| ||||||
Sbjct: 149 tcttgatatcaatacatttccctcctgattaccccttcaagccacccaaggcttccttca 208
Query: 209 ggactaaggttttccatccaaacatcaatagcaatggaaatatatgtttggacatactca 268
||| || |||| ||| |||||||||||||||| || | ||| || | ||||| ||||
Sbjct: 209 agacaaaagtttaccacccaaacatcaatagcagcggtagtatctgccttgacattctca 268
Query: 269 aagaacaatggagtcctgcactcaccatatccaaggttttgctgtccatatgctctttgc 328
| ||||||||||| |||||||| || | || ||||| || | || ||||||||| |||
Sbjct: 269 aggaacaatggagccctgcacttacagtttcaaaggtgttattatcaatatgctctctgc 328
Query: 329 ttacagacccaaatcctgatgatccactggttcctgaaattgctcat 375
| ||||| ||||| ||||||||||| ||||| ||||| |||||||||
Sbjct: 329 tgacagatccaaaccctgatgatcctctggtgcctgagattgctcat 375
>30169.m006544 ubiquitin-conjugating enzyme E2, putative
Length = 360
Score = 58.0 bits (29), Expect = 5e-08
Identities = 143/181 (79%)
Strand = Plus / Plus
Query: 20 tgaaagagctgaaggacttgcagagagatcctccaacttcatgcagtgcaggtcctgtag 79
|||| ||||| ||||| || |||| |||||||| || || ||||| || ||||| || |
Sbjct: 20 tgaaggagctcaaggatttacagaaggatcctcccacatcgtgcagcgctggtcccgttg 79
Query: 80 ctgaggatatgttccactggcaagctaccatcatcggtccgaatgacagtccatatgctg 139
|||| || ||||| || |||||||| || ||||| || || |||||||| ||||| |
Sbjct: 80 ctgaagacatgtttcattggcaagcaacaatcatgggacctcccgacagtccgtatgcag 139
Query: 140 gtggtgttttccttgtcactattcatttcccacctgactatcctttcaagcctcccaagg 199
| |||||||| || || ||||||||||| || || || ||||| || |||||||| ||||
Sbjct: 140 gaggtgtttttctagttactattcattttcctccagattatccatttaagcctccgaagg 199
Query: 200 t 200
|
Sbjct: 200 t 200