Jatropha Genome Database
- JcCB0115771.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0115771.10 - phase: 1 /partial
(791 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30169.m006389 lipoxygenase, putative 369 e-101
30169.m006387 lipoxygenase, putative 155 5e-37
29808.m000898 lipoxygenase, putative 68 9e-11
>30169.m006389 lipoxygenase, putative
Length = 2703
Score = 369 bits (186), Expect = e-101
Identities = 612/754 (81%)
Strand = Plus / Plus
Query: 31 gcaggggaatggctgttgaagacccatctgctccacatggtttaagactaacaattgaag 90
||||||||||||||||| |||| ||||| |||||||||||| ||| ||||| ||||||||
Sbjct: 1940 gcaggggaatggctgttcaagatccatcggctccacatggtgtaaaactaagaattgaag 1999
Query: 91 actacccatatgcaaacgatggattagttttatgggatgccatcaaagaatgggttagtg 150
||||||||| ||| | |||||| || || |||||||||| || |||| ||||| ||||
Sbjct: 2000 actacccatttgccagtgatggactacttctatgggatgcgattaaagcttgggtaagtg 2059
Query: 151 actatgtgaatcactactatccacactcaagttcgatagtgaacgatactgagctgcaag 210
||||||| ||||||||||||||| || |||| |||| | ||||| || || || |
Sbjct: 2060 actatgtcaatcactactatccagacccaagcctgatattatccgataaggaactccagg 2119
Query: 211 cattctggagagaagttagaacaatcggacacggtgacaaaaagaatgaatcgtggtggc 270
|||| |||| |||||| ||||| | || || ||||| |||||| ||||| | |||||||
Sbjct: 2120 cattttggaccgaagttcgaacagttggtcatggtgataaaaaggatgaaccctggtggc 2179
Query: 271 ctgagctgaaaacacctcaggacctgatagaaattattacaacaattgtatgggtagcct 330
||||| ||||||||||| | |||||||||||||| | ||||||||| ||||||| |||
Sbjct: 2180 ctgagttgaaaacacctaaagacctgatagaaatcgtctcaacaattgcatgggtaacct 2239
Query: 331 ccggtcatcacgcggcagtcaactttggtcaatacacatttgcaggttatttcccaaata 390
| ||||| || || ||||| |||||||| ||||| | | ||| || |||||||| ||||
Sbjct: 2240 caggtcaccatgctgcagtgaactttggacaatatgcgtatgcgggctatttccctaata 2299
Query: 391 gacctacaattgcaagaaaaataatgccaactgaagaatcaaccgaagaagattggaaat 450
||||||||| ||| ||| | |||||||| |||||| | || || |||| |||||||
Sbjct: 2300 gacctacaactgctagattgaaaatgccaagtgaagatccgactgatgaaggttggaaaa 2359
Query: 451 tctttttggaaaagcctgaagcagtacttctgcaaacattcccttcacaggttcaagcat 510
| ||| |||||| ||||||| |||||| || ||| |||||||||||||| || |||
Sbjct: 2360 tgtttgcggaaaaacctgaagttgtacttttgacaacgttcccttcacaggtccaggcaa 2419
Query: 511 caaaagtcatgactgttttggatgttctatctaatcactctcccgatgaggaatatatcg 570
||||||| ||| ||||||| ||||| |||| || || ||||| ||||| |||||||| |
Sbjct: 2420 caaaagtgatggctgttttagatgtgttatcaaaccattctcctgatgaagaatatatag 2479
Query: 571 gagagaaaatagaaccatcttggaatgaggaacctgttataaaagcagcttttgaaaagt 630
||||||||||||| ||| | ||| |||||| ||| ||||||||||| ||||||||||
Sbjct: 2480 gagagaaaatagagccagcctgggctgaggatcctaacataaaagcagcatttgaaaagt 2539
Query: 631 tcagtgggaagctgaaggagttagaaggaattattgatgaaagaaatgccgatgtgcatt 690
|| ||| | | ||||||| | ||||| ||||| |||||||| ||||| || ||
Sbjct: 2540 tcgctggaaggttgaaggaactggaagggattatcgatgaaaggaatgctaatccaagtt 2599
Query: 691 tgaagaacagaaatggagctggtattgtgccttatgagcttttgaagccattctcagagc 750
||||||| || ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2600 tgaagaataggaatggagctggaattgtgccttatgagcttttgaagccattctctgagc 2659
Query: 751 ctggagttacaacaaaaggagttccttacagtat 784
||||||||||| | ||||||||| ||||||||
Sbjct: 2660 ctggagttacagctcgaggagttccatacagtat 2693
>30169.m006387 lipoxygenase, putative
Length = 2370
Score = 155 bits (78), Expect = 5e-37
Identities = 426/542 (78%)
Strand = Plus / Plus
Query: 201 gagctgcaagcattctggagagaagttagaacaatcggacacggtgacaaaaagaatgaa 260
||||| ||||||| |||| |||| || ||||| | |||||||| ||||| ||| |||||
Sbjct: 1777 gagctccaagcatggtggacagaaattcgaacagtgggacacggcgacaagaaggatgaa 1836
Query: 261 tcgtggtggcctgagctgaaaacacctcaggacctgatagaaattattacaacaattgta 320
| |||||||||||||| |||||||| || ||||| || ||||| | || | || | |
Sbjct: 1837 ccatggtggcctgagctaaaaacaccacaagacctaattgaaatagtcactattatagca 1896
Query: 321 tgggtagcctccggtcatcacgcggcagtcaactttggtcaatacacatttgcaggttat 380
||| ||| || |||||||| || ||||| |||||||| ||||| |||||| ||||||
Sbjct: 1897 tggacagcttcaggtcatcatgctgcagtgaactttggacaatatgcatttggaggttac 1956
Query: 381 ttcccaaatagacctacaattgcaagaaaaataatgccaactgaagaatcaaccgaagaa 440
|| || || || || || ||||| ||||||| |||||||| ||| || |||| ||||||
Sbjct: 1957 tttcctaacaggccaaccattgctagaaaaaaaatgccaaatgaggatccaacagaagaa 2016
Query: 441 gattggaaattctttttggaaaagcctgaagcagtacttctgcaaacattcccttcacag 500
|| ||||| ||||| ||| | || || || |||||||| | ||| |||||| || ||
Sbjct: 2017 gactggaatttcttcttgcataaacccgaggcagtactattagcaactttccctacaaag 2076
Query: 501 gttcaagcatcaaaagtcatgactgttttggatgttctatctaatcactctcccgatgag 560
|||| ||| ||| ||| || ||||| | |||| |||| ||||| ||||| ||||||
Sbjct: 2077 cttcaggcaacaacagtagtggctgttctcaatgtgttatccaatcattctcctgatgag 2136
Query: 561 gaatatatcggagagaaaatagaaccatcttggaatgaggaacctgttataaaagcagct 620
|| ||||| || ||| ||| |||| | | ||| ||| ||||| ||||||||||||||
Sbjct: 2137 gagtatattggggagcaaaaggaacaagcatgggctgatgaaccgattataaaagcagct 2196
Query: 621 tttgaaaagttcagtgggaagctgaaggagttagaaggaattattgatgaaagaaatgcc 680
||||| ||||||| | | | |||||||||||||||||||||||||||||||||||||
Sbjct: 2197 tttgagaagttcaattgcaggctgaaggagttagaaggaattattgatgaaagaaattgt 2256
Query: 681 gatgtgcatttgaagaacagaaatggagctggtattgtgccttatgagcttttgaagcca 740
| | | ||||||||| ||||||| ||||||||| |||| ||| |||||||||| |||
Sbjct: 2257 aacagggagttgaagaaccgaaatggtgctggtattttgccatatcagcttttgaaacca 2316
Query: 741 tt 742
||
Sbjct: 2317 tt 2318
>29808.m000898 lipoxygenase, putative
Length = 2496
Score = 67.9 bits (34), Expect = 9e-11
Identities = 145/182 (79%)
Strand = Plus / Plus
Query: 489 ttcccttcacaggttcaagcatcaaaagtcatgactgttttggatgttctatctaatcac 548
||||||||||| |||||||| || |||| ||| |||||||||||||||| |||| |||
Sbjct: 2191 ttcccttcacaaattcaagcaacacaagttatggctgttttggatgttctgtctactcat 2250
Query: 549 tctcccgatgaggaatatatcggagagaaaatagaaccatcttggaatgaggaacctgtt 608
|| || |||||||| ||||| || ||||| |||||||| ||| |||| || |||||
Sbjct: 2251 tcaccagatgaggagtatattggtcagaaatcggaaccatcgtgggatgaagatcctgtc 2310
Query: 609 ataaaagcagcttttgaaaagttcagtgggaagctgaaggagttagaaggaattattgat 668
||||| || || |||| ||| |||| || || |||||||| | |||| ||| ||||||
Sbjct: 2311 ataaaggctgcatttgtaaaattcaatgccaaaatgaaggagcttgaagcaatcattgat 2370
Query: 669 ga 670
||
Sbjct: 2371 ga 2372
Score = 52.0 bits (26), Expect = 5e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 139 aatgggttagtgactatgtgaatcactactatcc 172
||||||| | ||||||||||||||||||||||||
Sbjct: 1838 aatgggtgactgactatgtgaatcactactatcc 1871