Jatropha Genome Database
- JcCB0115651.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0115651.10 + phase: 2 /pseudo/partial
(1597 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative 716 0.0
29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative 115 8e-25
>30202.m000262 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1812
Score = 716 bits (361), Expect = 0.0
Identities = 1224/1511 (81%), Gaps = 3/1511 (0%)
Strand = Plus / Plus
Query: 62 aatcttttacagaaagctgcttccatggtgttagataaagtggaaaatgttttggtttca 121
||||| ||||||| |||||| ||||||| |||||| || |||| || | | ||||||
Sbjct: 271 aatctgttacagagagctgcatccatggctttagatgctgttgaaagtgctctcgtttca 330
Query: 122 cacgaacgtaaataccctcttcctaaaacagcggacccaactgttcaaatttccggtaac 181
|| |||||||| |||| ||||| ||||| || |||||| || ||||||| ||||||
Sbjct: 331 catgaacgtaagcacccacttcccaaaactgcagacccagtagtccaaatttgtggtaac 390
Query: 182 ttcgctcccgtgccggaacaacctgttgtacgcgatttaccggtcaccggtaaaatccca 241
|||||||| || || || ||| | ||||| | | |||||| ||| | || |||||||||
Sbjct: 391 ttcgctcctgtccctgagcaatccgttgtgcacagtttaccagtcgctggaaaaatccca 450
Query: 242 gatagcattcgaggtgtctatctacgcaacggcgcaaacccacttcacgaaccggtgact 301
|||||||||| ||||| || | || ||||| || ||||||||||| |||||||| ||
Sbjct: 451 gatagcattcatggtgtttacattcgaaacggagcgaacccacttcatgaaccggttgct 510
Query: 302 ggtcaccacttcttcgatggcgacggcatggtccatgctgtccggttcgaagagggt--- 358
|||||||| ||||| ||||| || || ||||| |||||||||| ||||||| |||||
Sbjct: 511 ggtcaccatttctttgatggtgatggtatggttcatgctgtccagttcgaaaagggtggt 570
Query: 359 tcagtaagctatgcttgccggtttacggagacaaaccgtttggttcaagagcgaaaattg 418
|| || ||||||||||||||||| || || || || | || ||||||||||| ||||
Sbjct: 571 tctgttagctatgcttgccggttcactgaaactaataggtttgttcaagagcgtgaatta 630
Query: 419 ggacgtccaattttcccaaaggccataggtgagctccatgggcattctggaattgctagg 478
||||||||| ||||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 631 ggacgtccagttttccctaaggccataggtgagctacatggccattctgggattgctagg 690
Query: 479 ctattgcttttttatgcccgtggtatttttgatattgttgacccgagccatggacttggt 538
| |||| |||||||| ||||| | ||| | ||||||| || || |||||| ||||
Sbjct: 691 ttgctgctgttttatgctcgtggactggttggtcttgttgatcctagtcatggaactggt 750
Query: 539 gttgccaacgccgggttagtttactttaatggtcgtcttctagctatgtcagaagatgat 598
||||| ||||| || | || ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 751 gttgctaacgctggtcttgtctactttaatggccgtcttcttgctatgtctgaagatgac 810
Query: 599 ttgccttaccatgtccgtgttcttccttgtggagacctgaaaactgttgggcgttacaat 658
|||||||||||||||||||||||||||| ||| || || |||||||||| ||| || |
Sbjct: 811 ttgccttaccatgtccgtgttcttccttctggtgatctcaaaactgttgcgcgatatgac 870
Query: 659 ttcaatggccaactaaagagtacaatgattgctcatccaaaagttgacccattttctggt 718
|| ||| ||| || || |||||||||||||| |||||||||||||| || ||||||||
Sbjct: 871 tttgatgcccagcttaaaagtacaatgattgcgcatccaaaagttgatcctgtttctggt 930
Query: 719 gaattgtttgctcttagttatgatgttgtacaaaaaccatatctgaagtatttcagattt 778
||| ||||||||||||||||||||||||| ||||| || | ||||| |||||||| |||
Sbjct: 931 gaactgtttgctcttagttatgatgttgtccaaaagcctttcctgaaatatttcaggttt 990
Query: 779 tccccaatcggtaccaagtctaaagatgttgaaatctctcttgatgagccaacaatgatc 838
||||| || | |||||| ||||||||||| || |||||| ||||||| |||||
Sbjct: 991 tcccctgatgggaaaaagtctcccgatgttgaaatttcacttgatcagccaactatgatg 1050
Query: 839 catgattttgccattactgagaaatttgttgttattcctgatcaacaattggtcttcaag 898
|||||||||||||| |||||||| || |||||| ||||||| |||||| |||| ||||||
Sbjct: 1051 catgattttgccatcactgagaacttcgttgttgttcctgaccaacaagtggttttcaag 1110
Query: 899 ttaccagaaatgattcgcggtggctctccagtaatctacgacgagaataagatatcaaga 958
|| || |||||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||
Sbjct: 1111 ttgcctgaaatgatccgcggtggctctccagttatctatgacaagaacaagatgtcaagg 1170
Query: 959 tttggtattcttgacaagaaagcaaatgactcttcaaagattaggtggatagaagcacct 1018
|| || || || |||||||| | ||||| ||| ||||||| |||||| ||||||||
Sbjct: 1171 ttcggaatactagacaagaattccaatgatggttccaagattaagtggattgaagcacca 1230
Query: 1019 gattgcttctgtttccatctttggaatgcatgggaagagccagagagtgatgagattgtg 1078
||||| |||||||||||||| ||||| || ||||| ||||| || | |||||| ||||
Sbjct: 1231 gattgtttctgtttccatctctggaacgcctgggaggagcccgaaaccgatgaggttgtt 1290
Query: 1079 gtgattggatcttgtatgactcctccagattccattttcaacgaatgtgatgagagttta 1138
||| |||| ||||||||||||||||| ||||| ||||||||||||||||| |||||| ||
Sbjct: 1291 gtggttgggtcttgtatgactcctcctgattcaattttcaacgaatgtgaagagagtcta 1350
Query: 1139 aagagtgttttatcagaaataaggctaaatttgaaaactgggaagtccattcgcaggcct 1198
||||||||| |||||||||| ||||||||| | || || || ||||| | |||| | |
Sbjct: 1351 aagagtgttctatcagaaatcaggctaaatctaaagaccggtaagtctactcgccgtgcc 1410
Query: 1199 atcatttctgataaacatcaagtaaacttagaagcaggcatggtaaacaggaatcttctg 1258
||||||||| | | | ||||| || |||||||||| ||||| | | | || | ||
Sbjct: 1411 atcatttctcagcatgaacaagtcaatctagaagcaggaatggtgagccgtaacttgctt 1470
Query: 1259 ggaagaaaaacccagttcgcttatctagctcttgcagagccatggccaaaagtgtctgga 1318
|||||||| || | ||| ||||| ||||||||||||| |||||||| ||||| || |||
Sbjct: 1471 ggaagaaagactcggtttgcttacttagctcttgcagaaccatggcctaaagtttcagga 1530
Query: 1319 tttgccaaagttgatctctcaactggagagacaaagaagtatatctatggagacaataaa 1378
||||| || || || ||| ||||||||| | ||||| | |||||||||| |||
Sbjct: 1531 tttgctaaggtagacctcaacactggagaggttcacaagtacgtttatggagacagcaaa 1590
Query: 1379 tatggaggggagcctctgtttcttcctgattctaattcgggaaaagaagatgatgggttt 1438
||||| || ||||| |||||||||| ||| |||| | ||||||| |||||
Sbjct: 1591 tatggtggcgagccaatgtttcttcccagttccgattcagcccaagaagactctgggtac 1650
Query: 1439 attttatgttttgtgcatgatgagaaagagtggaaatcagagctacaaattgtgaatgcc 1498
|| || || ||||| ||||||||||| || |||||||||||||| |||||||| |||||
Sbjct: 1651 atcttgtgctttgtacatgatgagaaggaatggaaatcagagctgcaaattgtcaatgca 1710
Query: 1499 aagaatttgcagctagaagcaacagttaagcttccttctcgagttccttatggttttcat 1558
| |||| || ||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1711 atgaatctgaagctagaagcaacagttaagcttccatctcgagttccttatggctttcat 1770
Query: 1559 ggcacttttat 1569
||||| |||||
Sbjct: 1771 ggcacgtttat 1781
>29693.m001992 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1824
Score = 115 bits (58), Expect = 8e-25
Identities = 115/134 (85%)
Strand = Plus / Plus
Query: 1025 ttctgtttccatctttggaatgcatgggaagagccagagagtgatgagattgtggtgatt 1084
|||||||||||| | |||||||||||||||||||| || ||||| ||||||| ||
Sbjct: 1246 ttctgtttccatttgtggaatgcatgggaagagcctgaatcagatgaagttgtggtcatc 1305
Query: 1085 ggatcttgtatgactcctccagattccattttcaacgaatgtgatgagagtttaaagagt 1144
|||||||| |||||||| || || |||||||| || ||||||||||||||||||||||||
Sbjct: 1306 ggatcttgcatgactccaccggactccatttttaatgaatgtgatgagagtttaaagagt 1365
Query: 1145 gttttatcagaaat 1158
|| ||||| |||||
Sbjct: 1366 gtattatctgaaat 1379
Score = 73.8 bits (37), Expect = 3e-12
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 1467 agtggaaatcagagctacaaattgtgaatgccaagaatttgcagctagaagcaacagtta 1526
|||| ||||||||||| |||||||||||||||| |||||| ||| ||||||| | ||||
Sbjct: 1691 agtgcaaatcagagcttcaaattgtgaatgccacgaatttacagttagaagcttcggtta 1750
Query: 1527 agcttccttctcgagttccttatggttttcatggcac 1563
|||| || || | || |||||||| |||||||||||
Sbjct: 1751 agctgccatcaagggtaccttatggatttcatggcac 1787