Jatropha Genome Database

JcCB0115521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0115521.10 - phase: 0 
         (441 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001377 lipid binding protein, putative                         131   4e-30

>29780.m001377 lipid binding protein, putative
          Length = 363

 Score =  131 bits (66), Expect = 4e-30
 Identities = 153/182 (84%)
 Strand = Plus / Plus

                                                                       
Query: 253 gctagtgtgcctcctgcttgttgctccaaggttggtgccttgatcaacactgccccaaaa 312
           |||||||| ||||| ||||| ||||| || || |||||  | ||||| ||||| ||||||
Sbjct: 166 gctagtgtacctccagcttgctgctcaaaagtcggtgctctaatcaaaactgctccaaaa 225

                                                                       
Query: 313 tgtctttgtgccattatattgtcacctttggcaaaacaaagtggaatcaatcctgggatt 372
           ||||| |||||  || |  ||||||||||||| |  |||  ||||||||| || ||||||
Sbjct: 226 tgtctctgtgctgttctgctgtcacctttggctatgcaagctggaatcaagccagggatt 285

                                                                       
Query: 373 gctattacaattccaaagcgttgcaacattaagaatagacctgctggaaagaagtgtgga 432
           ||||| ||||||||||| || |||||||| ||||||||||||| ||||||||||||||||
Sbjct: 286 gctatcacaattccaaaacgatgcaacatcaagaatagacctgttggaaagaagtgtgga 345

             
Query: 433 ag 434
           ||
Sbjct: 346 ag 347