Jatropha Genome Database

JcCB0115061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0115061.10 - phase: 0 /partial
         (243 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002288 Transcription factor Dp-1, putative                     276   6e-74

>30078.m002288 Transcription factor Dp-1, putative
          Length = 1083

 Score =  276 bits (139), Expect = 6e-74
 Identities = 196/215 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   acacgccctcatgcaacagttgaagtggaaatatcagaagatatgcagctggtgcatttc 60
           ||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 775 acacgccctcatgcaactgttgaagtagaaatatcagaagatatgcagctggtccatttc 834

                                                                       
Query: 61  gactttaatagcaccccttttgagctgcatgatgataattatgtccttaaggcaatgaaa 120
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 835 gactttaatagcaccccttttgagctgcatgatgataattatgttctcaaggcaatgaaa 894

                                                                       
Query: 121 ttttgtgagagaccacagagtgatgatatggcacccaatatagctactgatggaggtgaa 180
           ||||||||||||||||| |||||   | | ||||| ||| |||||| |||||||||||||
Sbjct: 895 ttttgtgagagaccacaaagtgacagtgtagcaccaaatctagctaatgatggaggtgaa 954

                                              
Query: 181 ggttctagcatgtccaacatgtatcaacaacaaat 215
           || |||||||||||| |  |||| |||||||||||
Sbjct: 955 ggatctagcatgtcccatgtgtaccaacaacaaat 989