Jatropha Genome Database

JcCB0113691.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0113691.20 - phase: 0 /partial
         (150 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29583.m000188 Iron-sulfur assembly protein IscA, chloroplast pre...   129   5e-30

>29583.m000188 Iron-sulfur assembly protein IscA, chloroplast
           precursor, putative
          Length = 537

 Score =  129 bits (65), Expect = 5e-30
 Identities = 110/125 (88%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcctgagcatcctccttgtttaacaccaattctcaagcacaaatcttcatttcggtca 60
           ||||| ||||| |||||||||||||| ||||||||||||||||||||||||| ||| || 
Sbjct: 314 atgccagagcaacctccttgtttaactccaattctcaagcacaaatcttcatctcgatct 255

                                                                       
Query: 61  ttcctcatcttattcaggtgcttcaatgcattttccgtcaaagaaatcgccggagcaatc 120
           ||||||||||||||||  || ||||| ||||| |||||||  ||||||||||| ||||| 
Sbjct: 254 ttcctcatcttattcaaatgattcaacgcattctccgtcactgaaatcgccggcgcaatt 195

                
Query: 121 ccctc 125
           |||||
Sbjct: 194 ccctc 190