Jatropha Genome Database
- JcCB0113371.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0113371.20 - phase: 0 /partial
(591 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30040.m000265 nuclear matrix protein, putative 533 e-151
>30040.m000265 nuclear matrix protein, putative
Length = 1827
Score = 533 bits (269), Expect = e-151
Identities = 506/585 (86%)
Strand = Plus / Plus
Query: 1 aatgctttgactgatccccagcgggttcggacaccgtccattacagaatattggaaacct 60
||||||||||||||||| || || || || ||||| |||| |||||||||||||||||
Sbjct: 1234 aatgctttgactgatcctcaacgtgtccgaacacctgccatcacagaatattggaaaccc 1293
Query: 61 ttggctgaagatatggatccatcagctgggatagaagctgaatatcatcacaaaaataac 120
||||| ||||||||||| ||||||||||| ||||||||||||||||| || |||||||||
Sbjct: 1294 ttggcagaagatatggacccatcagctggaatagaagctgaatatcaccataaaaataac 1353
Query: 121 cgggtatattgctggaaaggtctacgtttttcagctaggcaggacttggatggattttct 180
|| |||||||||||||||||||| || |||||||||||||||||||| ||||| |||||
Sbjct: 1354 cgagtatattgctggaaaggtctgcggttttcagctaggcaggacttagatgggttttca 1413
Query: 181 agatttactgaccatggcatcgaaggagttgttcctctagaacttctgccccctgatgtc 240
||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 1414 agatttactgaccatggtattgaaggagttgtacctctagaacttctgccaccagatgtc 1473
Query: 241 cgatccaaatatcaggccaaacctaatgataggtccaaacgtgccaaaaaggaggaggtg 300
|| || ||||| || || ||||||||||||||||| ||||||||||||||||| || |
Sbjct: 1474 cggtcaaaataccaagctaaacctaatgataggtctaaacgtgccaaaaaggatgacata 1533
Query: 301 aagggtgcatcaaatcaagcagaagataatcagattacgacacctgcaagtgtgcttgat 360
||||||| ||| |||||| ||||||| ||||||||| | || |||||||||| | | |||
Sbjct: 1534 aagggtggatcgaatcaaacagaagagaatcagattgcaacgcctgcaagtgagatagat 1593
Query: 361 ggtgaaggaatcagaactgatgaagcctcagctactccaatggacactgatgctatggct 420
||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 1594 ggtgaaggaattagagctgatgaagccgcagctgctccaatggacactgatgcaatggct 1653
Query: 421 acaacagccagcacccctcaaggcggcactccaacgccagaagaacatcaaaagcaaagc 480
||| ||| || || | ||||| ||||||||||||||||| |||| |||| |||||||
Sbjct: 1654 acagcaggtagtacttcccaaggtggcactccaacgccagatgaacgccaaaggcaaagc 1713
Query: 481 ccagatacagatggaggtcaagaagcaggccagttagaagcagacggtgaaggagacgct 540
|| ||| |||||| ||||| || |||||||| || |||||||||||||||| ||| |||
Sbjct: 1714 cctgatgcagatgatggtcaggaggcaggccatttggaagcagacggtgaagtagaggct 1773
Query: 541 gcactgatagatggggagacagatgccgaagtagatttagaagca 585
| |||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 1774 gggatgatcgatggagagacggatgcagaagtagatttagaagca 1818