Jatropha Genome Database
- JcCB0112721.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0112721.10 - phase: 0 /pseudo
(987 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30174.m008887 nucleotide binding protein, putative 678 0.0
>30174.m008887 nucleotide binding protein, putative
Length = 1317
Score = 678 bits (342), Expect = 0.0
Identities = 760/900 (84%), Gaps = 12/900 (1%)
Strand = Plus / Plus
Query: 1 atggatccggttcttccgattgctgttctttcggtccttctcggagctctgatcgctttc 60
||||||||||||||||||||||| || |||| ||||||| ||||||||||||||| |
Sbjct: 1 atggatccggttcttccgattgccattgtttctatccttcttggagctctgatcgctatt 60
Query: 61 ctcttcttcaaaagctactcacacaagagggaatccgaaatcaaatccatcaccaagccg 120
||||||||||||||||||| | |||||| |||||||||| ||||||||| || |||
Sbjct: 61 ctcttcttcaaaagctacttcctcaagagaaaatccgaaattaaatccatcgcccctccg 120
Query: 121 gagcttgattcggctcctaaaaagcctacaaagcctgctcagcctgtaactaagaaatct 180
||||| ||||| |||||| ||||||||||| | | |||||||||| || || ||||||
Sbjct: 121 gagctccgttcggatcctaagaagcctacaaaacattctcagcctgttaccaaaaaatct 180
Query: 181 caccccaagcctcactctcatcactctcatgcttctgataaggatcaaattaagaggcat 240
||| |||| |||||||||||| || |||||||||| |||| || | | |||
Sbjct: 181 cactccaaacctcactctcat---------gccgctgataaggaacaaaataggcgacat 231
Query: 241 catccattggatttgaacactctgaaaggtcatggagattcagttaatgggctttgtttt 300
||||||||||||||||||||| ||||||| ||||||||| |||| | |||| | |||||
Sbjct: 232 catccattggatttgaacactttgaaaggccatggagatgcagtaactgggttatgtttc 291
Query: 301 tctaatgatggaaggagtttggcaacagcttgtggtgatggagtggtcagggtatttaag 360
|| ||||| || ||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 292 tccaatgacgggcggagtttggcaacagcttgtgcagatggagtggttagagtatttaag 351
Query: 361 ttggatgatgcttcaagtaaaagtttcaagtttctgagaattagtgtacctgctggaggt 420
||||||||||||||||||| ||||||||||||| ||||||||| | | || ||||||||
Sbjct: 352 ttggatgatgcttcaagtagaagtttcaagtttttgagaattaatttgccagctggaggg 411
Query: 421 cacccagtggcagtggcctttgctgatgatgcatcttctgtagtagtggcttctcaaact 480
|||||||||||| ||||| |||||||||| |||||||||||||| ||||| || |||
Sbjct: 412 attccagtggcagtgaccttttctgatgatgcttcttctgtagtagtcgcttcacagact 471
Query: 481 ctatctggtgcatctttatatatgtttggagaagaaaaggtcaaacc---taatgaatct 537
| || ||||||||||||||| ||| |||||| ||||| |||||| |||||| |||
Sbjct: 472 ttgtcaggtgcatctttatatttgtatggagaggaaaatcccaaaccaagtaatgattct 531
Query: 538 aagcagcaatccaagcttccccttccagaagtcaaatgggagcatcacaaaattcatgat 597
||||| ||| |||||||||| || |||||| |||||||||| |||| ||||||||||||
Sbjct: 532 aagcaacaacccaagcttccgctcccagaaatcaaatgggaacatcgcaaaattcatgag 591
Query: 598 aaaaatgctgttctgaccttagttggaactgctgcaacttatggaaccgctgatggaagt 657
|| || ||||| | || |||||||||||| |||||| ||||||| || |||||||||
Sbjct: 592 aataaggctgtgattactctagttggaactgttgcaacatatggaagtgcagatggaagt 651
Query: 658 gcaattgttgcctcttgttcagaggctactgatatcaaactttggtatggaagaaccggg 717
|||||||||||||||||||||||| ||| ||||||||||| ||| |||| | ||| |||
Sbjct: 652 tcaattgttgcctcttgttcagagggtaccgatatcaaactgtggcatgggaaaactggg 711
Query: 718 aagattttggggaatgttgatacaaatcaattgaaaaacaccatggctactgtatcacca 777
|| |||||||||||||||||||| ||||| ||||| |||||||||||| || | ||||||
Sbjct: 712 aatattttggggaatgttgatactaatcagttgaagaacaccatggctgctatttcacca 771
Query: 778 aatgggcgttttattgctgctgcggcattcactgcagatgtgaaggtctgggagattgtg 837
||||| || ||| |||||||||| || || ||||||||||||||||| ||||||||| |
Sbjct: 772 aatggacgctttgttgctgctgcagcttttactgcagatgtgaaggtttgggagattata 831
Query: 838 tattcaaaggatggatctgtcaaggaggttccaaaagttatgcagcttaaaggacacaag 897
|| ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 832 tactcaaaggatggttccgtcaaggaggttccaaaagttatgcagcttaaagggcacaag 891