Jatropha Genome Database

JcCB0112461.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0112461.20 - phase: 1 /partial
         (452 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002456 NAD dependent epimerase/dehydratase, putative            76   2e-13

>29851.m002456 NAD dependent epimerase/dehydratase, putative
          Length = 1755

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 161/202 (79%)
 Strand = Plus / Plus

                                                                        
Query: 229  tatatgatgatctcaagcccccaacatctccgattcctgctgcaccactggtatcaatcc 288
            |||||||||||||||| |||||||| || ||   ||||  ||||||| | | |||| | |
Sbjct: 1532 tatatgatgatctcaaacccccaacttcgccatctcctattgcaccagtaggatcagttc 1591

                                                                        
Query: 289  caacatcttccgagaatgggggacctaaggcaggaaacagtgcgcctccaacagcacctg 348
            || ||||||||  |||||  |  |||||||| || ||||| || |||||||||||||| |
Sbjct: 1592 caccatcttccacgaatgaagtgcctaaggcgggcaacagcgctcctccaacagcaccag 1651

                                                                        
Query: 349  aggatatgcagcaacatacagaagcaaagccaaagccactgtcaccattttccatgtatg 408
             ||| | ||||||  || ||||| | ||||||| |||||| || || | | ||||||| |
Sbjct: 1652 tggagaagcagcagaatgcagaaccgaagccaaggccactttcgccttataccatgtacg 1711

                                  
Query: 409  aagatatgaagcctccaacttc 430
            |||| |||||||||||||||||
Sbjct: 1712 aagacatgaagcctccaacttc 1733