Jatropha Genome Database

JcCB0112391.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0112391.10 + phase: 0 
         (927 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001959 Chalcone synthase, putative                             111   8e-24

>29648.m001959 Chalcone synthase, putative
          Length = 1110

 Score =  111 bits (56), Expect = 8e-24
 Identities = 194/240 (80%)
 Strand = Plus / Plus

                                                                       
Query: 279 gaaggctatacaagaatggggccaacctatatcgaagattacacatcttatattttgcac 338
           |||||||||| |||||||||| ||| | ||||| | ||| || || |||||||| |||||
Sbjct: 270 gaaggctataaaagaatggggacaatccatatcaaggataactcaccttatattctgcac 329

                                                                       
Query: 339 atcttcaggtgtaaatatgcctggtgcagatcttgagcttgtcaagcttcttggacttca 398
           |||||||||  | | |||||| ||||||||| ||||||||  |||||||||||| || | 
Sbjct: 330 atcttcaggaatcagtatgccgggtgcagattttgagcttaccaagcttcttggtctccc 389

                                                                       
Query: 399 aaattctgtgcaaagattcatgatgtatcaacaaggttgctttgcaggagctgcagctct 458
               || || ||||||| ||| || ||||||   |||||||||||||| ||   | ||||
Sbjct: 390 tccatccgtacaaagatccattatatatcaaagcggttgctttgcaggggcacaatctct 449

                                                                       
Query: 459 tcgtcttgctaaagatattgctgaaaataatgttgattcacgaattcttatcgtctgctc 518
           |||||| |||||||||||||||||||| ||||| || || || |||||||| || |||||
Sbjct: 450 tcgtctcgctaaagatattgctgaaaacaatgtcgaatcgcgcattcttattgtttgctc 509



 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                       
Query: 45  aattctagctattggtactgcaaatccaccaaactttatctaccaagcaaactatccaga 104
           ||||||||||||||| |||||||||||||| || | ||||| ||| ||  ||||||||||
Sbjct: 18  aattctagctattggcactgcaaatccacccaattatatcttccaggccgactatccaga 77

                    
Query: 105 cttctactt 113
           |||||||||
Sbjct: 78  cttctactt 86