Jatropha Genome Database

JcCB0111121.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0111121.10 - phase: 0 /partial
         (489 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005304 Cell growth-regulating nucleolar protein, putative      414   e-115

>29912.m005304 Cell growth-regulating nucleolar protein, putative
          Length = 939

 Score =  414 bits (209), Expect = e-115
 Identities = 369/420 (87%), Gaps = 3/420 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgtggtttcagtgtgaagattgcggagagaatttgaagaagcctaagttacctaat 60
           ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1   atggtgtggttccagtgtgaagattgcggagagaatttgaagaaacctaagttacctaat 60

                                                                       
Query: 61  cacttcagaatttgctcagcttctaagctatcatgtatcgattgcggagagatgttcggg 120
           ||||||||||||||||| ||  | ||||||||||| || ||||||||||| |||||||| 
Sbjct: 61  cacttcagaatttgctctgccaccaagctatcatgcattgattgcggagaaatgttcggt 120

                                                                       
Query: 121 caggatagtgttcagggccatactcagtgcattactgaggcggaaaaatatggtccgaaa 180
           || || || ||||| ||||| ||||||||||||||||||||||| || ||||| || || 
Sbjct: 121 caagacagagttcaaggccacactcagtgcattactgaggcggagaagtatggcccaaag 180

                                                                       
Query: 181 ggtcaagggaaagctccaaatggtgccactcctaagaccaacaagaacgcaaagcagcag 240
           || ||||||||   | |||||||||| || |||||  |||||||||| ||||  || || 
Sbjct: 181 ggacaagggaagatttcaaatggtgcaacacctaaatccaacaagaa-gcaa--caacac 237

                                                                       
Query: 241 cccgatgttgatataaatgttgggttatctgaacgccctccatggttttgtagtctctgc 300
           || |||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 238 cctgatgttgatataaccgttgggttatctgatcgccctccttggttttgtagtctctgc 297

                                                                       
Query: 301 aataccaaggctactagtaagcagactttgcttctccatgctgacggaaagaagcaccgg 360
           |||||||  |||||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 298 aataccagtgctactagtaagcaaacgttgcttctccatgctgatggaaagaagcatcgg 357

                                                                       
Query: 361 gcaaaggctcgagctattcatgctgccaagcaacaacaaactaaagagacagaagaatct 420
           || ||||| ||||||||||||||||| ||||| |||||| ||||| ||||||||||||||
Sbjct: 358 gcgaaggcccgagctattcatgctgctaagcagcaacaagctaaacagacagaagaatct 417