Jatropha Genome Database
- JcCB0110871.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0110871.10 + phase: 0 /partial
(945 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative 650 0.0
29854.m001132 Ubiquitin carboxyl-terminal hydrolase, putative 66 4e-10
>30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2817
Score = 650 bits (328), Expect = 0.0
Identities = 670/784 (85%)
Strand = Plus / Plus
Query: 37 cagttcaacgtggaggtttttccactcagtcttaaagtaattgattccagggatgactgt 96
||||| || |||||||||| |||||| |||||||| || | |||||||| |||||| ||
Sbjct: 472 cagtttaatgtggaggtttatccactgtgtcttaaattagtcgattccagagatgacagt 531
Query: 97 gaattcactatcaggttaagcaaaaaggcttctctccatgagctttatgagagggtttgt 156
||||| ||||| ||||||||||||||||||||||| ||| |||||| ||||||||| |||
Sbjct: 532 gaatttactataaggttaagcaaaaaggcttctctgcatcagctttttgagagggtgtgt 591
Query: 157 acacttagaggaatagagcgagataagaccatcatatgggactactttaataagcacaag 216
| |||| ||||| | ||| ||| |||| ||||||||||| |||| || |||| || |
Sbjct: 592 gctcttaaaggaacaaagcaagaaaagattatcatatgggattactacaacaagcgcagg 651
Query: 217 aactcacggttggttgattcaaatcgtaccctggaagaatcaaatttgcaaatggaccaa 276
| |||| ||| ||| | |||| ||||||||||| || ||||| |||||||||||||||
Sbjct: 652 cattcacaattgattgctgcaaaccgtaccctggaggagtcaaacttgcaaatggaccaa 711
Query: 277 gagattcttctggagctgcaagttggtgtcccttatccttcacaatctggaaaagattcg 336
||||||||||||||| |||||| || || ||||||| || || ||||| || |||||
Sbjct: 712 gagattcttctggaggtgcaaggtgatgggccttatctctcccagtctggcaaggattca 771
Query: 337 acgggaaatgagttggctttggtaaccatggaaccttcaaggacctcactgtcgattgca 396
||||||||||||||||||||||| | ||||||| |||||||||| ||||||||||||
Sbjct: 772 acgggaaatgagttggctttggtggcactggaaccagcaaggacctccctgtcgattgca 831
Query: 397 ggggggccttcattgtcaaatggtcattcaagtacttatagcttgaatttaaggccagga 456
||||| || ||||||||||||| |||||||||||||| ||||||| || |||||||||
Sbjct: 832 gggggtccaacattgtcaaatggacattcaagtacttacggcttgaacttgaggccagga 891
Query: 457 agtgctttaaacgcaggattcacagatattgatcttggatttggtgctcagactgctgtt 516
||||||||| | |||||||||| |||| |||| || || ||||||| | |||||||||
Sbjct: 892 ggtgctttaagcacaggattcactgataatgatgatgcatctggtgcttatactgctgtt 951
Query: 517 aggaggggtgagaggggagggttggcaggattacagaatatgggaaatacttgctttatg 576
|| || ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 952 agaagaagtgagaggggaggtttggcaggattacaaaatatgggcaatacatgctttatg 1011
Query: 577 aacagtgctcttcagtgcttggttcacactcccccacttgctgagtatttcttgcaagat 636
|||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||
Sbjct: 1012 aacagtgctcttcagtgcttggttcacactcccccacttgttgattatttcttaaaagat 1071
Query: 637 tactctgaggagatcaacactgaaaatcctttaggaatgcatggtgaacttgcacttgca 696
||||| || ||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 tactccgacgagattaacgcagaaaatcctttaggaatgcatggtgaacttgcacttgca 1131
Query: 697 tttggtgatttgttgaggaaactgtggtcctcagggagatctacaattgcaccacgtgca 756
|| || || |||||||||||||||||||||||||| | ||||| ||||||| |||| |
Sbjct: 1132 ttcggagacttgttgaggaaactgtggtcctcaggacggactacatttgcaccgcgtgta 1191
Query: 757 tttaaggggaaacttgctctttttgctccacaattcagtggttataatcagcacgattct 816
|||||||| ||||| || || |||||||| || ||||||||||||||||| || ||||||
Sbjct: 1192 tttaagggaaaactagcactatttgctccgcagttcagtggttataatcaacatgattct 1251
Query: 817 caag 820
||||
Sbjct: 1252 caag 1255
>29854.m001132 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2670
Score = 65.9 bits (33), Expect = 4e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 542 caggattacagaatatgggaaatacttgctttatgaacagtgctcttcagtgc 594
||||| |||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct: 866 caggactacagaatcttggaaatacttgctttatgaacagtgccattcagtgc 918