Jatropha Genome Database
- JcCB0110731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0110731.10 + phase: 0 /partial
(1510 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29820.m001006 breast cancer type 2 susceptibility protein brca2,... 781 0.0
>29820.m001006 breast cancer type 2 susceptibility protein brca2,
putative
Length = 3471
Score = 781 bits (394), Expect = 0.0
Identities = 1135/1379 (82%), Gaps = 11/1379 (0%)
Strand = Plus / Plus
Query: 142 cttgcaagatcatctcgtgggccattggttgacatttcaaataccctgggcacctcttgc 201
||||||||||||||| ||||||| ||||||||||||||||| || | ||| | | || |
Sbjct: 1165 cttgcaagatcatctagtgggccgttggttgacatttcaaacacaatcggctcttgttac 1224
Query: 202 acaaatcacagacgtgtgaataatgaaaaaaggaaacttggaaggggaacttctatttct 261
||||||||||||| || |||| ||||||| || | |||||||| ||| ||||| ||||
Sbjct: 1225 acaaatcacagacatgataatatcgaaaaaaagagagttggaaggagaagttctacttct 1284
Query: 262 caattcaagaggccccgcagttccaaattcatcattcctttgaacaagaatgtttcatac 321
| |||||||||||||||||| | |||||| | || |||||||||| |||| | ||||
Sbjct: 1285 ccattcaagaggccccgcagctgcaaatttaccacccctttgaacaggaattatgcatat 1344
Query: 322 gttctcaatggtttatctacttcatcatctgaaaattcctgctgcaga-agaacagtttc 380
| || | |||||||||| |||||||||||||||||||| | | ||| | | || ||||
Sbjct: 1345 gctcctagtggtttatctgcttcatcatctgaaaattccggttttagacatagca-tttc 1403
Query: 381 tactagatatccttttcggactccaagaatgtatatcaaggaatactttgaagtgccttc 440
||||||||||||| || | ||||||||||||| ||||| || || |||||||||
Sbjct: 1404 cactagatatccttatcaaggttcaagaatgtatattaaggactatttcagagtgccttc 1463
Query: 441 ctcagataaaaacatgctggagcacttcacggaccaagtagggtggatcaaaccagaggc 500
| || |||| |||||| ||||||||| ||| ||||||| || || |||||||| |
Sbjct: 1464 atttgacaaaagcatgctagagcacttcgcgggccaagtaatatgtattaaaccagatac 1523
Query: 501 tgcagagaagtacaaattctgtgatgaatctggtgtgaactgcattggagcggaagcttt 560
|| ||||||||||| ||| || ||||||||||| | | | || ||||| | ||||||||
Sbjct: 1524 tgtagagaagtacacattttgggatgaatctggccttagcggccttggatctgaagcttt 1583
Query: 561 ataccatatgttggttcaatcaggagcttcgatacaatgtgtttccaaagagtggactat 620
|| ||||||||||||| |||||||||||| |||||| || ||| ||||||||| |
Sbjct: 1584 tcacgatatgttggttcagtcaggagcttcggtacaatttgcttctaaagagtgggtaac 1643
Query: 621 gaatcactacaagtggattatttggaaacttgcttgttatgagagatgttatccctggaa 680
||||| ||||| ||||| |||||||||| || ||||| | ||||| ||||| | |||
Sbjct: 1644 aaatcattacaaatggatagtttggaaactagcatgttacgggagattctatccattgaa 1703
Query: 681 atctgccacaaggtttttgacagtctccaatgtgcatgaggaactgaaatatagatatga 740
|||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 1704 atctgcaacaagatttttgacagtctccaatgtgcttgaggaactgaagtatagatatga 1763
Query: 741 aagagaagtgaatcatggacaccgttctgcaattaagagaattctggaaggagattcacc 800
||||||||| |||||||| ||||||||||| |||||||||||| ||||||| ||| ||||
Sbjct: 1764 aagagaagtaaatcatggccaccgttctgcgattaagagaattttggaaggtgatgcacc 1823
Query: 801 gccttcttctatgatggttctatgcatttcagctatctgcatcagttgtaaaccaaaaat 860
||| ||||| ||| | |||||||||||||||||||| | ||||||||| ||||||| ||
Sbjct: 1824 gccctcttcaatgttaattctatgcatttcagctatccgtatcagttgtcaaccaaagat 1883
Query: 861 agagaacctggcattaaatggggatgaatgtagtaatgctgcaagaatggaactaacaga 920
|||| | |||||| ||||| ||| | ||| ||||||| || | | |||||||| ||
Sbjct: 1884 tgagactccagcattagatgggagtgattatagcaatgctgaaaaagttgaactaactga 1943
Query: 921 tggatggtattcaatagatgctcttctggatataccactgtcaaagcaactttccgctgg 980
||| ||||||||| |||||||| || ||||| |||| |||||||||||||| | ||||
Sbjct: 1944 tgggtggtattcagtagatgctattttggatgtaccgttgtcaaagcaacttgcttctgg 2003
Query: 981 aaaactttttgtggggcaaaaaattcgaatatggggagcaagattgtgtggctgggctgg 1040
|||| | |||||||| || ||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 2004 aaaattgtttgtgggtcagaaacttcgaatatggggagcaagattatgtggctgggttgg 2063
Query: 1041 ccctgtttcaccccttgagattcttgca---tcaaggactgtcagtctgctgttgcatat 1097
|||||||| || |||||| |||||| | ||||| || || || ||||||||||
Sbjct: 2064 tcctgtttcgcctcttgaggttcttgtaagccttaggacagttagcttgttgttgcatat 2123
Query: 1098 caatggaacgtatagagctcattgggctgatcggctaggattctgcaagggtgttggtcc 1157
|||||||| |||||||||||||||||||| || |||||||| || || |||||| ||||
Sbjct: 2124 aaatggaacatatagagctcattgggctgaccgactaggattttgtaatggtgttagtcc 2183
Query: 1158 tcctttggcttttagatgcataaaaaataatggtggtcccatccctcggactttggttgg 1217
||||||||| ||||| ||||| |||| |||||| ||||| |||||| ||| ||||||||
Sbjct: 2184 tcctttggcatttaggtgcatcaaaagtaatgggggtcctgtccctcagacattggttgg 2243
Query: 1218 agtcacgcgaatataccctattctatataaggagaagttaagagatggaggatctattgt 1277
|||||| || | || ||| | || || |||||||||||| | ||||| |||||||||||
Sbjct: 2244 agtcacaagactctatcctgtcctctacaaggagaagttatgtgatggtggatctattgt 2303
Query: 1278 gagatcagagaggatggaggctagaacaatgcaattgtacaaccagagacattctgcagt 1337
|||||||||||| |||||||||| | ||||||| ||||||| |||||| || ||||| ||
Sbjct: 2304 gagatcagagagaatggaggctaaagcaatgcagttgtacagccagaggcactctgctgt 2363
Query: 1338 tgtggaaggcattgtttccgagtaccaaaga------aaagggtcccatatttataatga 1391
||| ||||||||||| || || | ||||||| ||||| |||||||| ||||||||
Sbjct: 2364 tgtagaaggcattgtgtctgaattccaaagagagatgaaaggatcccatatctataatga 2423
Query: 1392 cagtgatagtgaagaaggagctaaaatcttgaagatacttgagacagcggcagacccaga 1451
||||||||||||||||| |||||||| |||||||| |||||||| || |||| |||||
Sbjct: 2424 tagtgatagtgaagaaggtgctaaaattttgaagattcttgagacggcatcagaaccaga 2483
Query: 1452 agttataatggcagagatgagtccagagcagctaaattcattcgcttcttgtcaagcaa 1510
|||||||||||||||||||||||| ||||| |||| |||||| || |||| |||||||
Sbjct: 2484 agttataatggcagagatgagtccggagcaactaacttcatttgcctcttaccaagcaa 2542