Jatropha Genome Database

JcCB0109661.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0109661.10 - phase: 0 
         (420 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29269.m000251 conserved hypothetical protein                          240   5e-63

>29269.m000251 conserved hypothetical protein
          Length = 420

 Score =  240 bits (121), Expect = 5e-63
 Identities = 337/409 (82%)
 Strand = Plus / Plus

                                                                       
Query: 7   agaggtagagggaaagggaagaagcagactgttattgcttcacatgaagatcctagtatc 66
           ||||| ||||| ||||||||||||||| |||||||||||||||||||||  ||| | |  
Sbjct: 7   agaggcagaggtaaagggaagaagcaggctgttattgcttcacatgaaggccctggcagt 66

                                                                       
Query: 67  ggtgaagatgaccaagttccagcttataaaagaagaggaaggccaacaaagccattgaag 126
           |   |||| ||  ||||||| ||||||| |||||||||||||||||  || ||| || | 
Sbjct: 67  gacaaagaagaaaaagttcctgcttatagaagaagaggaaggccaatgaaaccagtggat 126

                                                                       
Query: 127 gatgatactgaagaaggagaggaagaagctgcagagatcaaagaagatgacaaggatgtg 186
           ||||||| || | ||| ||| |||| |||| ||||| | || |||||||  |||||||  
Sbjct: 127 gatgataatggacaagaagaagaagcagcttcagagctaaatgaagatgggaaggatgca 186

                                                                       
Query: 187 aatgattcaatctctaataaagatgcgaaaagtcttgctgctactgaaaatggacagaaa 246
           || ||| | ||| ||| |||||||| ||||||||   || | ||||| ||||||| ||||
Sbjct: 187 aaagataccatccctagtaaagatgtgaaaagtcagtctcccactgagaatggacggaaa 246

                                                                       
Query: 247 aggaagaggcctggacataccagtgaaaatgcagattctgtcaaagaggaaaatgatgtt 306
           ||||||||||||||||||||||  |||||| || |||| ||||||||||| |||| ||||
Sbjct: 247 aggaagaggcctggacataccaaagaaaatacaaattcagtcaaagaggataatggtgtt 306

                                                                       
Query: 307 agaacaaaattgagtactgataattcagcagtgagtggtagattccaacaaaatgggagc 366
            |||||||||||||||||  ||||||| || |||||  | |||||| ||||| |||||||
Sbjct: 307 ggaacaaaattgagtactagtaattcaacaatgagtactggattccgacaaattgggagc 366

                                                            
Query: 367 cggcgcaaaaacaagcctagaagagctgctgaagctgttgttgagtgca 415
            |||| ||||||||||| ||  |||||||||||||||||||||||||||
Sbjct: 367 aggcggaaaaacaagcccaggcgagctgctgaagctgttgttgagtgca 415