Jatropha Genome Database

JcCB0109541.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0109541.20 + phase: 1 /pseudo/partial
         (240 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001424 Adipocyte plasma membrane-associated protein, puta...    66   1e-10

>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 1143

 Score = 65.9 bits (33), Expect = 1e-10
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                       
Query: 130 ggacccgaagatatagcatatgacagcaagtcggggctgatttacacgagctgtcaagat 189
           ||||| |||||||| |||| |||||||||||| ||||| ||||| || || |||  ||  
Sbjct: 250 ggaccagaagatattgcatttgacagcaagtcagggctcatttatacaagttgtgcaggc 309

                                                        
Query: 190 gggtggatcaagcgagtcacggtgaatgactcggtgtctgactcg 234
           |||||||| |||||||| || || || ||||||||| ||||||||
Sbjct: 310 gggtggataaagcgagttacagtcaacgactcggtgactgactcg 354