Jatropha Genome Database
- JcCB0108421.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0108421.10 - phase: 0 /partial
(1275 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29729.m002379 conserved hypothetical protein 507 e-143
>29729.m002379 conserved hypothetical protein
Length = 1185
Score = 507 bits (256), Expect = e-143
Identities = 490/568 (86%)
Strand = Plus / Plus
Query: 667 gatggggagatgtattactctcagtatttgcaggcaacagagggggctggtagtggaggg 726
||||||||||| |||||||| |||||||||||||||| || ||| |||||| ||| |||
Sbjct: 496 gatggggagatttattactcgcagtatttgcaggcaaatgaagggtctggtaatggtggg 555
Query: 727 aaagatgtaggtgtggagaatggttgcggttttagtggaagaaaggaaagttcgtcattt 786
|||||| | | | ||||||||||||| || |||||||||||||| ||| ||| || |||
Sbjct: 556 aaagatatggctttggagaatggttgtggctttagtggaagaaaagaagcttcttctttt 615
Query: 787 tctattgagtctggagagtccttgagagccattctatcagacgccgtcacgggagctcta 846
|| ||| ||||| || || ||||||||||||||||| ||| | |||||||||||||||
Sbjct: 616 tcatctgactctggtgattctttgagagccattctatctgaccctgtcacgggagctcta 675
Query: 847 atggatgatgcaatgatattgccatgtgggcattcatttggagctggtggaatacaacat 906
||||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| |||
Sbjct: 676 atggatgatgcaatgatattgccatgtggacattcttttggtgttggtggaatacagcat 735
Query: 907 gttatcagaacgaaggcttgctatacttgttcacaatcaatttctgaagatgcaatagct 966
||||||||||||| ||||| || ||||| || || |||| ||||||| || | |||
Sbjct: 736 attatcagaacgaaagcttgttacacttgctcccagtcaacaactgaagactcagttgct 795
Query: 967 cctaacctctctctccgagctgccgtacaggcattccgccgggaagaggagttacaattt 1026
||||| || || ||| ||||||| || |||||||| ||||||||||| ||||||||||||
Sbjct: 796 cctaatctttccctcagagctgcagtgcaggcatttcgccgggaagaagagttacaattt 855
Query: 1027 tatcgctcatccaaacgaaggagagagaggtttgaccaggataaaggtgtttatggtgat 1086
||||||||||||||| | | |||||||||||||||||||||||| |||| || |||||||
Sbjct: 856 tatcgctcatccaaaaggaagagagagaggtttgaccaggataagggtggttttggtgat 915
Query: 1087 tcaactgcaacagataccccaaggggtcggggtgtgcagttccctttcgctgtaacagac 1146
|| ||||||| ||| |||||||||||||||| ||||||||||| || || || |||||
Sbjct: 916 tcgactgcaatggatgccccaaggggtcggggagtgcagttcccatttgccgtgacagat 975
Query: 1147 cgggttattataaagggaaacaagaggacgccacaacggtttgttgggcgtgaggctgtt 1206
||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct: 976 cgggttattataaagggaaacaagaggacaccacagcgatttgttggacgtgaggctgtt 1035
Query: 1207 gtgacaactcagtgcttaaatggatggt 1234
|||||||| ||||| |||||||||||||
Sbjct: 1036 gtgacaacacagtgtttaaatggatggt 1063
Score = 81.8 bits (41), Expect = 9e-15
Identities = 125/153 (81%)
Strand = Plus / Plus
Query: 30 ctcccaaaacggcctaaattcccaacttgtttttcaagacgaccccttgcgcttcaattg 89
|||||||||||| || ||| ||||| | || || |||||||| || || ||||| |||||
Sbjct: 18 ctcccaaaacggtcttaatacccaattcgtgttccaagacgatcctttacgctttaattg 77
Query: 90 cggccctcctcagcgccgggtcggaggggatccgggccccaaaaccaccacccgagaact 149
||| ||| | | ||||| ||||| || |||||||| ||||||||||| ||||| |||||
Sbjct: 78 cggacctacaaatcgccgagtcggcggcgatccgggtcccaaaaccacaacccgtgaact 137
Query: 150 ctccggctttatcgacgataagcttttctcttc 182
|||| || || ||||| ||||||||||||||
Sbjct: 138 tgccggtttcatagacgacaagcttttctcttc 170
Score = 52.0 bits (26), Expect = 8e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 241 cctgaattcccgcgcaatatgtaccg 266
||||||||||||||||||||||||||
Sbjct: 208 cctgaattcccgcgcaatatgtaccg 233