Jatropha Genome Database
- JcCB0108171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0108171.10 - phase: 0
(1791 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29647.m001994 hypothetical protein 460 e-128
30128.m008803 conserved hypothetical protein 101 1e-20
29726.m004024 hypothetical protein 54 3e-06
>29647.m001994 hypothetical protein
Length = 1800
Score = 460 bits (232), Expect = e-128
Identities = 684/830 (82%), Gaps = 6/830 (0%)
Strand = Plus / Plus
Query: 13 ctgcaggtatctaggaaatttgcagaggggaagatttcatttgaagaatatgttttcact 72
|||||||| || ||| ||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 13 ctgcaggtgtcgaggtcattcgcagaggggagaatttcatttgaagaatatgttttcact 72
Query: 73 ttaaaaagtgcagttggcatcaatatgttcatagaagcagtaggcattggcaaagggaag 132
| ||||| ||||||||||| || |||| ||| || | |||||| ||||||||
Sbjct: 73 ctgaaaagaatagttggcatcagtacactcatccaagttgtggccattggaaaagggaaa 132
Query: 133 catgacctcactggcatcgccatggaaccaacaaagcccggtcatataaattctattcgt 192
||||||||||||| | ||| |||| |||| |||||| ||| | || |||| |||||
Sbjct: 133 gatgacctcactggtactgccgtggagccaataaagcctaatcaaacaatttctgttcgt 192
Query: 193 cctgaaataccaattggcaaggcctgctcctctcttacatcttcagacattatcaagttt 252
|||||||||||| |||| || ||||| ||||||||||||||||||| ||| |||||||||
Sbjct: 193 cctgaaataccagttggaaaagcctggtcctctcttacatcttcaggcatcatcaagttt 252
Query: 253 ctaactggggattttaggttgagcaaagcccgatccaatcatctcttctgggaagctgtt 312
|| || ||||||||||| || || ||||||||||| | ||||||||||||||||||||
Sbjct: 253 ctgacaggggattttagattaagtaaagcccgatctggtgatctcttctgggaagctgtt 312
Query: 313 tggccccgacttttagctagaggatggcactccgagcagcctaaggataatggctcttct 372
||||||||||||||||| |||||||||||||| || |||| ||||| |||||| || |
Sbjct: 313 tggccccgacttttagcaagaggatggcactctgaaaagcccaaggacaatggcatttgt 372
Query: 373 ggttccaagcattccttggtatttctcattcctggtgttaaaaagttttcaaggaggaga 432
||||| ||| |||| ||||||||||||||||||||| | |||||||| |||||||| |||
Sbjct: 373 ggttctaagaattctttggtatttctcattcctggtatcaaaaagttctcaaggagaaga 432
Query: 433 cttgtcaaaagtaaacactactttgattctgttagtgatgtcttgaacaaagttgcttca 492
||||||||| | || ||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 433 cttgtcaaaggcaaccactactttgattctgttactgatgtcttgtgtaaagttgcatca 492
Query: 493 gacccaggactgcttgagcttgaaattgaagaagtcaaaggtagcaaacataaggaagaa 552
|| || ||||| ||||||||||| ||||||| | || | ||| ||||||||||||||
Sbjct: 493 gaacctggactacttgagcttgatattgaagccacccaaagcagccaacataaggaagaa 552
Query: 553 --tgcaattgggacccatccctaaaactggaccaagatggtttgataaacaagcaacacc 610
|||| | ||| ||| | ||| | |||||| |||||| | ||| |||||||||
Sbjct: 553 ggtgcact--ggatccacctggaaatcaggaccaggatggtctctcaaaaaagcaacact 610
Query: 611 aatgttatctccagcctcataggtcaaattatagtcaggatgtacctaaatttacagtag 670
| |||||||||||||| | || ||| | |||| |||| ||||| | ||||||||||| |
Sbjct: 611 attgttatctccagccacgtaattcacaatataatcagaatgtaacaaaatttacagttg 670
Query: 671 tggataccagtttggctcatggagcagaac-aacacaaggtgagagaactcagaagttta 729
||||||||||||||||||| |||||||||| |||| |||||||| || || |||||||||
Sbjct: 671 tggataccagtttggctcacggagcagaacgaaca-aaggtgagggagcttagaagttta 729
Query: 730 cctgttgaaactactggtatgtcaacctcctctagtctttctagtgaaactcaagaagat 789
|||||||||| | || || | || | | ||| |||||||||||||||||| | ||||||
Sbjct: 730 cctgttgaaaatgctagtttatctagtttctccagtctttctagtgaaactgatgaagat 789
Query: 790 acatctgagaactcacaagagaatgcagaagaatctaacacctcatatcc 839
|||||||| | |||||||| |||| || |||| ||||||||||| ||||
Sbjct: 790 acatctgaagattcacaagaaaatgtagtagaaactaacacctcaaatcc 839
Score = 85.7 bits (43), Expect = 8e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 972 caaggaggaaaagaagactatgaagtatcaattcggccggaaggtaaagtctagttgctc 1031
|||||||| || |||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 987 caaggaggtaaggaagactatgaagtatcaattcagccggaaggcggagtctggttgctc 1046
Query: 1032 aaaatatttggttcc 1046
||||||||||||||
Sbjct: 1047 caaatatttggttcc 1061
Score = 61.9 bits (31), Expect = 1e-08
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1519 agccggaggcaaagtacaaggaaccggccattgactacgaaggcattggaagctctggaa 1578
||||||||||| |||||||||| || |||||||| ||||||||| |||||||| | |||
Sbjct: 1534 agccggaggcagagtacaaggagtcgtccattgaccacgaaggcactggaagctttagaa 1593
Query: 1579 ttaggattttt 1589
| ||||||||
Sbjct: 1594 atgggattttt 1604
Score = 60.0 bits (30), Expect = 5e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1220 ctgccagttctttggctaaagacagtccagttgagagcaatgaagg 1265
|||| ||||||||||||||||| ||||||| |||||| ||||||||
Sbjct: 1235 ctgctagttctttggctaaagatagtccagctgagagtaatgaagg 1280
Score = 54.0 bits (27), Expect = 3e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1318 tccccaaagttgattgacttgaacatacctcatgtatcaccagattt 1364
||||| ||||||||||| |||||||| ||| |||||||||||||||
Sbjct: 1333 tcccctaagttgattgatttgaacattccttctgtatcaccagattt 1379
>30128.m008803 conserved hypothetical protein
Length = 2889
Score = 101 bits (51), Expect = 1e-20
Identities = 117/139 (84%)
Strand = Plus / Plus
Query: 389 tggtatttctcattcctggtgttaaaaagttttcaaggaggagacttgtcaaaagtaaac 448
||||||||||||||||||||||||| ||||| || | |||| |||||| ||| |||| |
Sbjct: 1211 tggtatttctcattcctggtgttaagaagttctcgaaaaggaaacttgtgaaaggtaatc 1270
Query: 449 actactttgattctgttagtgatgtcttgaacaaagttgcttcagacccaggactgcttg 508
||||||||||||| ||||||||||| ||| |||||| || || || ||| ||| |||
Sbjct: 1271 actactttgattcagttagtgatgttctgagcaaagtggcatctgaaccaaaacttattg 1330
Query: 509 agcttgaaattgaagaagt 527
||||||||| |||||||||
Sbjct: 1331 agcttgaaactgaagaagt 1349
>29726.m004024 hypothetical protein
Length = 2268
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 27 gaaatttgcagaggggaagatttcatttgaagaatatgttttcactttaaa 77
|||||||| |||||| || || | | |||||||||||||||||||||||||
Sbjct: 693 gaaatttggagagggaaatatgttacttgaagaatatgttttcactttaaa 743