Jatropha Genome Database
- JcCB0107751.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0107751.20 - phase: 0
(267 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29933.m001439 r2r3-myb transcription factor, putative 293 3e-79
30027.m000837 r2r3-myb transcription factor, putative 115 1e-25
29983.m003281 r2r3-myb transcription factor, putative 96 1e-19
30190.m011004 ODORANT1 protein, putative 74 5e-13
29908.m006031 r2r3-myb transcription factor, putative 70 7e-12
30054.m000809 r2r3-myb transcription factor, putative 56 1e-07
>29933.m001439 r2r3-myb transcription factor, putative
Length = 1029
Score = 293 bits (148), Expect = 3e-79
Identities = 214/236 (90%)
Strand = Plus / Plus
Query: 28 aatggactaaagaaaggaccttggactccggaggaagatcaaaagcttattgattatata 87
||||| |||||||| || || ||||| || || |||||||| ||||| ||||||||||||
Sbjct: 28 aatgggctaaagaaggggccatggacacctgaagaagatcagaagctaattgattatata 87
Query: 88 cagaaacatggatatggaaactggagaacactaccgaagaatgctgggctacaaaggtgt 147
||||||||||| ||||| |||||||||||||| || ||||||||||| || ||||| |||
Sbjct: 88 cagaaacatggttatggcaactggagaacacttccaaagaatgctggactgcaaagatgt 147
Query: 148 ggaaagagttgccgtcttcgttggactaattatctaagacctgacatcaagagaggacga 207
||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||
Sbjct: 148 ggaaagagttgccgtcttcgttggactaactatttgagacctgatatcaagagaggacga 207
Query: 208 ttttcttttgaagaagaggagacaataattcagctacacagtatattaggaaacaa 263
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 208 ttttcttttgaagaggaggagacaataattcagctgcacagtatattaggaaacaa 263
>30027.m000837 r2r3-myb transcription factor, putative
Length = 267
Score = 115 bits (58), Expect = 1e-25
Identities = 169/206 (82%)
Strand = Plus / Plus
Query: 19 tgcgataaaaatggactaaagaaaggaccttggactccggaggaagatcaaaagcttatt 78
||||||||||||||| ||||||| || || |||||| | ||||||||||| ||| | ||
Sbjct: 19 tgcgataaaaatggattaaagaagggtccatggactgctgaggaagatcagaagttgatc 78
Query: 79 gattatatacagaaacatggatatggaaactggagaacactaccgaagaatgctgggcta 138
|||||||| |||||||||||| |||| ||| | | || || |||||||| || |||
Sbjct: 79 gattatattcagaaacatggacatgggcgatggcggatcctcccaaagaatgcaggtcta 138
Query: 139 caaaggtgtggaaagagttgccgtcttcgttggactaattatctaagacctgacatcaag 198
|||| ||||| |||||||| |||||||| ||||||||||| |||||||||| || ||
Sbjct: 139 aaaagatgtgggaagagttgtcgtcttcgctggactaattacttaagacctgatattaaa 198
Query: 199 agaggacgattttcttttgaagaaga 224
|||||| |||||||||||| |||||
Sbjct: 199 agaggaaaattttcttttgaggaaga 224
>29983.m003281 r2r3-myb transcription factor, putative
Length = 1035
Score = 95.6 bits (48), Expect = 1e-19
Identities = 180/224 (80%)
Strand = Plus / Plus
Query: 1 atgggaagagcgccatgttgcgataaaaatggactaaagaaaggaccttggactccggag 60
||||||||||| || || || || |||| |||||| |||||||| ||||||||||| ||
Sbjct: 1 atgggaagagcaccttgctgtgacaaaactggactcaagaaaggtccttggactccagac 60
Query: 61 gaagatcaaaagcttattgattatatacagaaacatggatatggaaactggagaacacta 120
|||||||| || || ||| |||||| || |||||| || |||||| | || ||
Sbjct: 61 gaagatcataaactcatttcttatattcaccttcatggacccggcaactggcgtaccctc 120
Query: 121 ccgaagaatgctgggctacaaaggtgtggaaagagttgccgtcttcgttggactaattat 180
|| ||||||||||| || ||||| ||||||||||| || |||||||| ||||| || |||
Sbjct: 121 cctaagaatgctggtcttcaaagatgtggaaagagctgtcgtcttcgatggacgaactat 180
Query: 181 ctaagacctgacatcaagagaggacgattttcttttgaagaaga 224
|| ||||||| |||| ||||||| | || ||||||||||||||
Sbjct: 181 ctccgacctgatatcaggagaggaaggttctcttttgaagaaga 224
>30190.m011004 ODORANT1 protein, putative
Length = 846
Score = 73.8 bits (37), Expect = 5e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 151 aagagttgccgtcttcgttggactaattatctaagacctgacatcaagagagg 203
|||||||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 151 aagagttgccgtcttcgttggactaattatcttcgtcctgacctcaagagagg 203
>29908.m006031 r2r3-myb transcription factor, putative
Length = 843
Score = 69.9 bits (35), Expect = 7e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 28 aatggactaaagaaaggaccttggactccggaggaagatcaaaagcttattgattatata 87
|||||||| |||||||||||||||||||| || ||||||||||| ||| |||| || ||
Sbjct: 28 aatggactgaagaaaggaccttggactcctgaagaagatcaaaaacttgttgactacatc 87
Query: 88 cagaaacatgg 98
|| ||||||||
Sbjct: 88 caaaaacatgg 98
>30054.m000809 r2r3-myb transcription factor, putative
Length = 969
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 145 tgtggaaagagttgccgtcttcgttggactaattatctaagacctgacatcaagagagga 204
||||||||||||||| | || || ||||| ||||||||||| ||||| ||||| ||||||
Sbjct: 148 tgtggaaagagttgcagactgcgatggacaaattatctaaggcctgatatcaaaagagga 207