Jatropha Genome Database

JcCB0107371.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0107371.10 + phase: 0 /partial
         (348 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007071 bifunctional dihydrofolate reductase-thymidylate s...   396   e-110
30170.m014082 bifunctional dihydrofolate reductase-thymidylate s...   125   2e-28

>30131.m007071 bifunctional dihydrofolate reductase-thymidylate
            synthase, putative
          Length = 1587

 Score =  396 bits (200), Expect = e-110
 Identities = 293/324 (90%)
 Strand = Plus / Plus

                                                                        
Query: 22   aacggggagttgtcttgtcaaatgtatcagcgatctgctgacatgggtctgggtgtgcca 81
            ||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1258 aacggggagttatcatgtcaaatgtatcagcgatctgctgacatgggactgggtgtgcca 1317

                                                                        
Query: 82   ttcaacattgcatcttatgcgctcttgacatgcattgtgtctcatgtttgtgatcttgtt 141
            |||||||||||||||||||  ||||||||||||||  |  |||||||||||||||| |||
Sbjct: 1318 ttcaacattgcatcttatggtctcttgacatgcataattgctcatgtttgtgatctcgtt 1377

                                                                        
Query: 142  cctggtgattttgttcatgtgcttggcgatgctcatgtttatcggactcatgtcaggcct 201
            ||||||||||||||||||||| | || ||| ||||||||||||| |||||||| ||||||
Sbjct: 1378 cctggtgattttgttcatgtgatcggggatactcatgtttatcgcactcatgttaggcct 1437

                                                                        
Query: 202  ctccaggagcagcttcagaaaccgccaaagccttttccaattttgaagattaatccggag 261
            ||||||||||||||||||||||  ||||| ||||||||||| |||||||| || || |||
Sbjct: 1438 ctccaggagcagcttcagaaactcccaaaaccttttccaatattgaagatcaacccagag 1497

                                                                        
Query: 262  aagaaaaacatagattcttttgtagcagctgatttcaaactcataggttatgatcctcat 321
            || || |||||||||||||| || ||||||||||| ||||||||||| ||||||||||| 
Sbjct: 1498 aaaaagaacatagattctttcgtggcagctgattttaaactcataggatatgatcctcac 1557

                                    
Query: 322  caaaaaattgaaatgaaaatggca 345
            || |||||||||||||||||||||
Sbjct: 1558 cacaaaattgaaatgaaaatggca 1581


>30170.m014082 bifunctional dihydrofolate reductase-thymidylate
            synthase, putative
          Length = 1776

 Score =  125 bits (63), Expect = 2e-28
 Identities = 165/199 (82%)
 Strand = Plus / Plus

                                                                        
Query: 25   ggggagttgtcttgtcaaatgtatcagcgatctgctgacatgggtctgggtgtgccattc 84
            |||||| |||||||||||||||| |||||||||||||| || ||||| || |||||||| 
Sbjct: 1441 ggggagctgtcttgtcaaatgtaccagcgatctgctgatatcggtcttggagtgccattt 1500

                                                                        
Query: 85   aacattgcatcttatgcgctcttgacatgcattgtgtctcatgtttgtgatcttgttcct 144
            |||||||| | ||||||  | |||||||||||  |  | |||||||||| ||||||||||
Sbjct: 1501 aacattgccttttatgctttattgacatgcataattgcccatgtttgtgctcttgttcct 1560

                                                                        
Query: 145  ggtgattttgttcatgtgcttggcgatgctcatgtttatcggactcatgtcaggcctctc 204
            ||||||||| | ||| || |||| ||||||| ||||| |   |||||| |  ||||| | 
Sbjct: 1561 ggtgattttatccatttgattggggatgctcgtgtttgtacaactcatattgggcctttg 1620

                               
Query: 205  caggagcagcttcagaaac 223
            ||| |||||||||||||||
Sbjct: 1621 cagaagcagcttcagaaac 1639