Jatropha Genome Database

JcCB0106871.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0106871.20 - phase: 0 /partial
         (268 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29675.m000398 alpha-1,3-mannosyl-glycoprotein beta-1, 2-n-acetyl...   258   1e-68

>29675.m000398 alpha-1,3-mannosyl-glycoprotein beta-1,
           2-n-acetylglucosaminyltransferase, putative
          Length = 1170

 Score =  258 bits (130), Expect = 1e-68
 Identities = 172/186 (92%)
 Strand = Plus / Plus

                                                                       
Query: 23  acccagaaaggcctggagagttgattgcatactacaagatagcacggcattacaaatggg 82
           ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 509 acccagataggcctggcgagttgattgcatactacaagattgcacggcattacaaatggg 568

                                                                       
Query: 83  cattggatcaactattctacaagcataacttcagccgagtaatcatacttgaagatgata 142
           | ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 569 cgttggatcaactgttctacaagcacaacttcagcagagtaatcatacttgaagatgata 628

                                                                       
Query: 143 tggagattgcccctgattttttcaattattttgaggctgcagcagatcttcttgacaagg 202
           ||||||||||||||||||||||  |||| |||||||||||||||| | | |||||||| |
Sbjct: 629 tggagattgcccctgatttttttgattactttgaggctgcagcagctgtccttgacaaag 688

                 
Query: 203 ataagt 208
           ||||||
Sbjct: 689 ataagt 694