Jatropha Genome Database

JcCB0106871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0106871.10 + phase: 0 /pseudo/partial
         (659 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29932.m000590 ribose-5-phosphate isomerase, putative                   98   8e-20

>29932.m000590 ribose-5-phosphate isomerase, putative
          Length = 795

 Score = 97.6 bits (49), Expect = 8e-20
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                       
Query: 151 ggaatacccacttcaaaaaagactcaccaacacgctttacctctgggtattcctttatct 210
           |||||||||||||| |||||||||||  |||| |||||| |||| || ||||||||||||
Sbjct: 235 ggaatacccacttccaaaaagactcaaaaacaagctttatctcttgggattcctttatct 294

                            
Query: 211 gatcttgattctcaccc 227
           |||||||||||||||||
Sbjct: 295 gatcttgattctcaccc 311



 Score = 67.9 bits (34), Expect = 7e-11
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 471 tttgtcaccgataatgggaattatattgtggatttgcttttaaaaaaggatattggtgat 530
           ||||| || ||||||||||||||||||||||| ||| |||| || ||||| |||||||||
Sbjct: 607 tttgttactgataatgggaattatattgtggacttgttttttaagaaggagattggtgat 666

             
Query: 531 tt 532
           ||
Sbjct: 667 tt 668