Jatropha Genome Database

JcCB0105091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0105091.10 + phase: 0 
         (684 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011120 Dehydration-responsive element-binding protein 1F,...   147   1e-34
30190.m011119 Dehydration-responsive element-binding protein 1A,...    96   3e-19

>30190.m011120 Dehydration-responsive element-binding protein 1F,
           putative
          Length = 693

 Score =  147 bits (74), Expect = 1e-34
 Identities = 233/286 (81%)
 Strand = Plus / Plus

                                                                       
Query: 97  gacgaagaagtactgctagctacaagctacccgaagaagcgagcagggcggcgaatattt 156
           ||||||||||| ||| |||| || ||||| |||||||||||||| |||||| || | || 
Sbjct: 94  gacgaagaagtgctgttagccacgagctatccgaagaagcgagctgggcggagagtgttc 153

                                                                       
Query: 157 aaggaaacacgacatcccatttttcgtggagttcgaaaaagaaacaatgaaaaatgggtt 216
           ||||| || ||||||||  | ||| | || ||| | || || || ||||| || ||||| 
Sbjct: 154 aaggagactcgacatcctgtctttagaggcgttaggaataggaataatgacaagtgggtc 213

                                                                       
Query: 217 tgtgagcttagagaacccaataagaagacacgtatatggctcggtacatatccaacacca 276
           || |||||  | || || ||||||||  || | |||||||| ||||| ||||| || || 
Sbjct: 214 tgcgagctacgtgagccaaataagaaatcaagaatatggcttggtacttatcctactcct 273

                                                                       
Query: 277 gaaatggcggccagagcacatgacgtggctgcattagcgcttagaggaaaatcggcttgt 336
           |||||||| || |||||||| ||||| |||||||| || |||||||||||||| ||||| 
Sbjct: 274 gaaatggcagctagagcacacgacgttgctgcattggctcttagaggaaaatctgcttgc 333

                                                         
Query: 337 cttaactttgcagattcttcttggaggttgccggtgcctgtttcta 382
           ||||||||||| || ||| ||||||||||||| |||||||||||||
Sbjct: 334 cttaactttgctgactctgcttggaggttgcctgtgcctgtttcta 379


>30190.m011119 Dehydration-responsive element-binding protein 1A,
           putative
          Length = 705

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 99/116 (85%)
 Strand = Plus / Plus

                                                                       
Query: 250 atatggctcggtacatatccaacaccagaaatggcggccagagcacatgacgtggctgca 309
           |||||||| || || ||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 274 atatggcttggaacttatcctacaccagaaatggcagccagagcacatgatgtagctgca 333

                                                                   
Query: 310 ttagcgcttagaggaaaatcggcttgtcttaactttgcagattcttcttggaggtt 365
           || || || ||||| ||||| |||||||| |||||| | |||||  ||||||||||
Sbjct: 334 ttggccctaagaggcaaatctgcttgtctcaacttttctgattccgcttggaggtt 389