Jatropha Genome Database

JcCB0104791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0104791.10 + phase: 0 /partial
         (977 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014309 two-component system sensor histidine kinase/respo...   208   5e-53

>30147.m014309 two-component system sensor histidine kinase/response
           regulator, putative
          Length = 2265

 Score =  208 bits (105), Expect = 5e-53
 Identities = 246/291 (84%), Gaps = 9/291 (3%)
 Strand = Plus / Plus

                                                                       
Query: 649 aaaaaggctaaggttgtttggacaaattcacttcataaccgcttcttgcaagctataaac 708
           |||||||||||||| || |||||||||||||||||||| || |||||||| || || |||
Sbjct: 616 aaaaaggctaaggtcgtctggacaaattcacttcataatcggttcttgcaggccattaac 675

                                                                       
Query: 709 catattgggttggaaaaggctgttcccaagagaattcttgaattcatgggtgtgccaggg 768
           ||||| ||  | || |||||||| || ||||||||||||||||| |||  ||||||||||
Sbjct: 676 catataggacttgacaaggctgtcccaaagagaattcttgaatttatgaatgtgccaggg 735

                                                                       
Query: 769 ctaactagggaaaatgtcgccagccatttacagaaataccgattgttcctgaaaaaagtg 828
           || ||||| ||||||||||| |||||||| ||||||||  |||| |||||||||||||| 
Sbjct: 736 ctcactagagaaaatgtcgctagccatttgcagaaatatagattattcctgaaaaaagtt 795

                                                                       
Query: 829 gcggagagaggactttggtcatcgcag---ctatcagaaaaggcatttaggtcatctttt 885
           ||||||||||| ||||||||||| |||   |||||||||| |||  | || ||||| |||
Sbjct: 796 gcggagagaggtctttggtcatcacaggctctatcagaaagggccatgagatcatccttt 855

                                                              
Query: 886 gcatctgggtattgctcttccttgttc---aaaaacgcccatcaagattat 933
           |||||||| |||   |||||| |||||   ||||| |||||||||||||||
Sbjct: 856 gcatctggttat---tcttccatgttcttgaaaaatgcccatcaagattat 903



 Score = 85.7 bits (43), Expect = 5e-16
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                       
Query: 211 gatggagcattcgacttggttatcactgatcttcatatgcctgaaatgaatggtttggaa 270
           ||||| |||||||||||||| |||||||||||||||||||| | |||||||||  |  ||
Sbjct: 190 gatggcgcattcgacttggtcatcactgatcttcatatgccgggaatgaatgggatacaa 249

                                                  
Query: 271 ctacaaaaacaagtgaaagaaaaattcaagattcctgtt 309
           |||||||||||| |  | ||| |||| ||||||||||||
Sbjct: 250 ctacaaaaacaaatagatgaagaatttaagattcctgtt 288