Jatropha Genome Database
- JcCB0104661.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0104661.10 + phase: 0
(441 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30005.m001304 actin depolymerizing factor, putative 507 e-143
29895.m000310 actin depolymerizing factor, putative 113 9e-25
30174.m009006 actin depolymerizing factor, putative 76 2e-13
30147.m013737 actin depolymerizing factor, putative 74 8e-13
29585.m000599 actin depolymerizing factor, putative 74 8e-13
>30005.m001304 actin depolymerizing factor, putative
Length = 441
Score = 507 bits (256), Expect = e-143
Identities = 393/441 (89%)
Strand = Plus / Plus
Query: 1 atgtcattcaggggactaagccggcctaatgcaacatcagggatgggtgttgctgatcac 60
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtctttcaggggaatatcccggcctaatgcaacatcagggatgggtgttgctgatcac 60
Query: 61 agcataaacacattcttggaactgcagaggaagaaagttcaccgctatgtggtatttaga 120
|||||||||||||||||||| |||||||| ||||| || |||||||||||||| |||| |
Sbjct: 61 agcataaacacattcttggagctgcagagaaagaaggtccaccgctatgtggtgtttaaa 120
Query: 121 attgatgnnnnnnngaaggaagtcgtggttgagaagactggtggccctgctgagagctac 180
||||||| ||| || |||||||| |||||||||||||||||||||||||||||
Sbjct: 121 attgatgagaagaagaaagaggtcgtggtagagaagactggtggccctgctgagagctat 180
Query: 181 gaggatttcgctgcatctttgcctgagaatgactgcagatatgctgtatatgactttgat 240
|||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 181 gaggattttgctgcatctttgcctgataatgactgtcgatatgctgtttatgactttgat 240
Query: 241 tttgtgacttctgagaattgtcagaagagcaagatatttttcattgcatggtctccttca 300
||||| ||||| ||||||||||| ||||||||||| || ||| ||||||||||||| |||
Sbjct: 241 tttgtcacttcagagaattgtcaaaagagcaagatcttcttctttgcatggtctccatca 300
Query: 301 acctctcgaatccgtgccaagatgctctacgcaacttctaaagacaggttcagacgagag 360
|||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct: 301 acctctagaatccgtgccaagatgctctacgccacatctaaagacaggttcagacgtcag 360
Query: 361 ctggatggtatccactatgagattcaggccactgaccctactgagatggatctggaagtg 420
|||||||||||||||||||||||||||| |||||||| || || |||||||| ||||||
Sbjct: 361 ttggatggtatccactatgagattcaggctactgacccgacagaaatggatcttgaagtg 420
Query: 421 atcagagaacgcgctaattaa 441
| ||||| ||||| ||||||
Sbjct: 421 cttagagatcgcgcaaattaa 441
>29895.m000310 actin depolymerizing factor, putative
Length = 423
Score = 113 bits (57), Expect = 9e-25
Identities = 189/233 (81%)
Strand = Plus / Plus
Query: 196 tctttgcctgagaatgactgcagatatgctgtatatgactttgattttgtgacttctgag 255
||||||||||||||||| || | |||||||| ||||| ||||||||||| || |||||
Sbjct: 178 tctttgcctgagaatgattgtcgttatgctgtctatgattttgattttgtcacatctgac 237
Query: 256 aattgtcagaagagcaagatatttttcattgcatggtctccttcaacctctcgaatccgt 315
||||| || ||||||||||| || || ||||| ||||||||||| |||| | |||
Sbjct: 238 aattgccaaaagagcaagatcttctttattgcttggtctccttctgggtctcacgttcgt 297
Query: 316 gccaagatgctctacgcaacttctaaagacaggttcagacgagagctggatggtatccac 375
|| |||||||| || |||||||| || | |||| ||||| ||| ||||| || ||||
Sbjct: 298 gcaaagatgctatatgcaacttccaaggccaggatcagaagagcactggaaggcgtccat 357
Query: 376 tatgagattcaggccactgaccctactgagatggatctggaagtgatcagaga 428
||||| || ||||| |||||||| |||||||||||||| || ||| |||||||
Sbjct: 358 tatgaaatccaggcaactgacccaactgagatggatcttgaggtgctcagaga 410
>30174.m009006 actin depolymerizing factor, putative
Length = 396
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 220 tatgctgtatatgactttgattttgtgacttctgagaattgtcagaagagcaagatattt 279
|||||||| ||||| ||||||||| |||| ||||||||| |||||||||||||| ||
Sbjct: 175 tatgctgtttatgattttgattttacgactaatgagaattgccagaagagcaagattttc 234
Query: 280 ttcattgcatggtctcct 297
|||||||| |||||||||
Sbjct: 235 ttcattgcttggtctcct 252
>30147.m013737 actin depolymerizing factor, putative
Length = 1497
Score = 73.8 bits (37), Expect = 8e-13
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 177 ctacgaggatttcgctgcatctttgcctgagaatgactgcagatatgctgtatatgactt 236
|||||| |||||||| ||||||||||||| |||| ||| | |||||||| ||||| ||
Sbjct: 1233 ctacgacgatttcgccgcatctttgcctgctgatgagtgccgctatgctgtctatgattt 1292
Query: 237 tgattttgtgacttctgagaattgtcagaagagcaagatatttttcattgcatggtctcc 296
|||||| ||| ||||||||||||||| ||||| || || || ||||||||||||||
Sbjct: 1293 tgatttcaccactaatgagaattgtcagaaaagcaaaattttctttattgcatggtctcc 1352
Query: 297 t 297
|
Sbjct: 1353 t 1353
>29585.m000599 actin depolymerizing factor, putative
Length = 420
Score = 73.8 bits (37), Expect = 8e-13
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 209 atgactgcagatatgctgtatatgactttgattttgtgacttctgagaattgtcagaaga 268
|||| ||| |||||||||| ||||||||||||| |||||| |||||| ||||||||||
Sbjct: 188 atgaatgccgatatgctgtctatgactttgattatgtgacggatgagaactgtcagaaga 247
Query: 269 gcaagatatttttcattgcatggtctcct 297
| | ||| |||| |||||||||||||||
Sbjct: 248 gtaggatcgtttttattgcatggtctcct 276