Jatropha Genome Database
- JcCB0103641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0103641.10 + phase: 0
(498 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m003939 mads box protein, putative 244 4e-64
30174.m009079 mads box protein, putative 78 6e-14
29790.m000814 mads box protein, putative 56 2e-07
>30138.m003939 mads box protein, putative
Length = 735
Score = 244 bits (123), Expect = 4e-64
Identities = 245/285 (85%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 91 ttcatgggggaagatcttgattctttaagtctcaaagaacttcaaaatttggagcaacag 150
|||||||||||||| |||||| | |||| |||||||| ||||| ||||||||||||||
Sbjct: 334 ttcatgggggaagaacttgataccttaaccctcaaagaccttcagaatttggagcaacaa 393
Query: 151 atcgattctgctcttaagcacataagatcaagaaagaaccaacagatgtatgaatccatt 210
|| |||||||||||||| ||| | || ||||||||||| |||| |||||| ||||| |||
Sbjct: 394 attgattctgctcttaaacacgttaggtcaagaaagaatcaactgatgtacgaatcaatt 453
Query: 211 tcagaactccagaagaaggataaggcattgcaggagcaaaataaccagcttgcaaagaag 270
||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 454 tcagaactccaaaagaaggataaggcattgcaggagcaaaacaaccagctcgcaaagaag 513
Query: 271 atcaaggaaaaggagaaggcaatggctcaacagacaaatttggagcagcaacagaatcaa 330
| ||||| || |||||||||| |||||| |||||| | | || ||||||| ||||||
Sbjct: 514 gtaaaggagaaagagaaggcaaaggctcagcagacacagtggg---agcaacaaaatcaa 570
Query: 331 gcagtaaattcatcacctgttcttataccacagtcaatgcagtcc 375
| ||| | ||||||||||||||| |||||||| |||| ||||||
Sbjct: 571 ggtgtagactcatcacctgttcttctaccacagccaattcagtcc 615
>30174.m009079 mads box protein, putative
Length = 543
Score = 77.8 bits (39), Expect = 6e-14
Identities = 147/183 (80%)
Strand = Plus / Plus
Query: 139 ttggagcaacagatcgattctgctcttaagcacataagatcaagaaagaaccaacagatg 198
|||||||||||| | ||| ||||||| |||||||| | | ||||| ||||||| ||||
Sbjct: 196 ttggagcaacagcttgatactgctctaaagcacatccggacgagaaaaaaccaactgatg 255
Query: 199 tatgaatccatttcagaactccagaagaaggataaggcattgcaggagcaaaataaccag 258
| ||| ||||| || || || ||||| ||||| |||||| | || |||||||||||| |
Sbjct: 256 tttgagtccatctctgagcttcagaaaaaggagaaggcaatacaagagcaaaataacatg 315
Query: 259 cttgcaaagaagatcaaggaaaaggagaaggcaatggctcaacagacaaatttggagcag 318
|| ||||| |||| ||||| |||||||||||| |||| || ||| || || |||||||
Sbjct: 316 ctatcaaagcagattaaggagaaggagaaggcagtggcacagcaggcactttgggagcag 375
Query: 319 caa 321
|||
Sbjct: 376 caa 378
>29790.m000814 mads box protein, putative
Length = 567
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 142 gagcaacagatcgattctgctcttaagcacataagatcaagaaagaaccaac 193
||||||||||| ||| |||||||||||| | | ||||||||||||||||||
Sbjct: 199 gagcaacagattgatactgctcttaagcgcgtgcgatcaagaaagaaccaac 250