Jatropha Genome Database

JcCB0103441.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0103441.10 - phase: 0 
         (825 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28976.m000160 conserved hypothetical protein                          396   e-110

>28976.m000160 conserved hypothetical protein
          Length = 768

 Score =  396 bits (200), Expect = e-110
 Identities = 305/340 (89%)
 Strand = Plus / Plus

                                                                       
Query: 229 ctcggtgatgttaccattttcaccgctgccggtgagcccgtcatgatcaaggatctgtgg 288
           ||||| |||||||| ||||||||||| || ||||||||||||||| | ||  |||| |||
Sbjct: 214 ctcggcgatgttactattttcaccgccgctggtgagcccgtcatgtttaaaaatctttgg 273

                                                                       
Query: 289 gaccaaaacgaggggatagctgttgttgcgcttttgaggcattttggttgcccttgctgt 348
           |||||||||||||| || |||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 274 gaccaaaacgagggaattgctgttgtggcgcttttgaggcactttggatgcccttgctgt 333

                                                                       
Query: 349 tgggaacttgcttcagtattgaaagaatcaaaatcaaaatttgaatcagctggtgtcaaa 408
           ||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||| |||
Sbjct: 334 tgggagcttgcttcagtattgaaagaagctaaatcaaaatttgattcagctggtgttaaa 393

                                                                       
Query: 409 ttaattgcaattggtgttggtgcgcctaataaagctcgcattcttgcagaccggttacca 468
            |||||||||||||||||||||| |||||||||||||| || || |||||||||||||||
Sbjct: 394 ctaattgcaattggtgttggtgctcctaataaagctcgaatgctcgcagaccggttacca 453

                                                                       
Query: 469 tttccaatggattgcctttatgcagatcctgatcgtaaggcctatgatgtcttggggtta 528
           ||||||||||||||||| || || |||||| | ||| |||||||  |||||||||| |||
Sbjct: 454 tttccaatggattgcctgtacgctgatcctaaccgtgaggcctacaatgtcttgggatta 513

                                                   
Query: 529 tactatggctttggacgtacattcttcaatccagccagtg 568
           ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 514 tactatggctttggacgcacattcttcaatccagctagtg 553



 Score =  174 bits (88), Expect = 5e-43
 Identities = 184/216 (85%)
 Strand = Plus / Plus

                                                                       
Query: 610 gctaaggtgttctccagatttgatgctcttcaaaaagctgtcaagaactacaccattgaa 669
           ||||| |||||||| ||||||||| |||||  | ||||||| || |||||||| ||||||
Sbjct: 553 gctaaagtgttctctagatttgattctcttagacaagctgttaaaaactacactattgaa 612

                                                                       
Query: 670 gccacccctgatgataggagtggtgtactgcaacagggtggaatgttcgtcttcaaagga 729
           ||||| || |||||||| |||||||| ||||| ||||| || ||||||||||||||||| 
Sbjct: 613 gccacgccagatgatagaagtggtgtgctgcagcagggagggatgttcgtcttcaaaggg 672

                                                                       
Query: 730 aagcagttactatatgccaggaaagatgaaggtactggcgatcatgctcccttggatgat 789
           ||||||||  ||||||| ||||||||||| || || || ||||||||| |||||||||||
Sbjct: 673 aagcagttgttatatgctaggaaagatgagggaacaggtgatcatgcttccttggatgat 732

                                               
Query: 790 gtctttaatatctgctgcaaggttccaattgcatga 825
           |||||| |  | || |||||||| ||| ||||||||
Sbjct: 733 gtctttgacgtatgttgcaaggtaccagttgcatga 768