Jatropha Genome Database

JcCB0102421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0102421.10 - phase: 0 /partial
         (488 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008986 dtdp-4-dehydrorhamnose dehydrogenase, putative          309   8e-84

>30174.m008986 dtdp-4-dehydrorhamnose dehydrogenase, putative
          Length = 957

 Score =  309 bits (156), Expect = 8e-84
 Identities = 399/480 (83%)
 Strand = Plus / Plus

                                                                       
Query: 9   gaagaatagagtattggtaataggaggaacaggctacttagggcaacacctattgcaagg 68
           |||||| | ||| |||||| |||||||||| || ||||||||||||||| ||||||||||
Sbjct: 9   gaagaagaaagtgttggtagtaggaggaactgggtacttagggcaacacttattgcaagg 68

                                                                       
Query: 69  cctttcagagatcaaagaaagacctttcgatattgctttcacataccactccagttccag 128
           ||||||||||||| |||| || || | |||| |||| || ||  | || |||| ||||| 
Sbjct: 69  cctttcagagatcgaagacagtccatacgatcttgcatttactcatcattccaattccac 128

                                                                       
Query: 129 tcctcctcaactcttgcttgattcatatcctcattctcgctcatttcgtgtcgatataaa 188
           ||||||||| | |||||||||| |   || ||| || | ||| || |  |||||| |  |
Sbjct: 129 tcctcctcagcccttgcttgatgccgttcgtcactccccctctttccacgtcgatttgca 188

                                                                       
Query: 189 aactggagagggatttcaaacaatctcttatgaatttggccagcctgatgttgttgtgaa 248
           ||||||||| ||||||||| | ||  |  |||||||||| ||||||||||||||||| ||
Sbjct: 189 aactggagatggatttcaagccattacacatgaatttgggcagcctgatgttgttgtaaa 248

                                                                       
Query: 249 ttgtgctgcgatctcagtacctcgcgcctgtgaaatggatcccactgctgctatgtctat 308
           ||||||||| || ||  ||||||| |||||||||| ||||||  |  |||||||||||||
Sbjct: 249 ttgtgctgcaatttctttacctcgtgcctgtgaaaaggatcctgccactgctatgtctat 308

                                                                       
Query: 309 aaatgtaccttgctcacttgtaaattggttatcgagctttgaattgaataagactcttct 368
           |||| |||||| ||| ||||| ||||||||||| | |||||||       | ||||||||
Sbjct: 309 aaatataccttcctctcttgtcaattggttatctacctttgaaggccgagatactcttct 368

                                                                       
Query: 369 tatccatctatcaactgatcaagtttatgaagggatgaaatccttctacaaggaagaaga 428
           ||| |||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||
Sbjct: 369 tatacatctatctactgatcaagtttatgaaggggtaaaatccttctacaaagaagaaga 428

                                                                       
Query: 429 cgaaaatgttcctgtgaatgtatatggaaaatcaaaactggcagcagagcaatttatttc 488
           ||||  |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 429 cgaagctgttcctgtgaacgtatatggaaaatcaaaactggaagcagagaaatttatttc 488