Jatropha Genome Database

JcCB0102141.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0102141.10 - phase: 0 /partial
         (475 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006480 hypothetical protein                                     84   9e-16

>30169.m006480 hypothetical protein
          Length = 5748

 Score = 83.8 bits (42), Expect = 9e-16
 Identities = 138/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 58  ggagttgtgcaatcctacgacccatcgtctggcttctttgagatcgtttacgaagacggc 117
           ||||| || ||||| |||||| | |||||||| || || |||||||||||||  ||||||
Sbjct: 58  ggagtagttcaatcgtacgacgcgtcgtctggattattcgagatcgtttacggggacggc 117

                                                                       
Query: 118 gattccgaggagcttgatttctcggaagtcgtttccttgttggagcggaaagaagctgtg 177
           ||||| || || |||||||| || ||||| | ||| ||||| |||| || ||||||||  
Sbjct: 118 gattctgaagaacttgatttttctgaagttgcttctttgttagagcagacagaagctgaa 177

                                                             
Query: 178 ccagttgatcacaagcatcgactcggtcgtaggcctaagaagcgacgtcg 227
           || | ||| || |||| ||| || |||||||| ||||||||||| |||||
Sbjct: 178 ccgggtgagcataagcctcggcttggtcgtagacctaagaagcggcgtcg 227